RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 Q8N9W7 124 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 MTORP42345 2549 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 CTSGP08311 255 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 MUSTN1Q8IVN3 82 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 CEND1Q8N111 149 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 C4orf3Q8WVX3 66 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 RPL39LQ96EH5 51 aaKnown RBP5.57□□□□□ -1.52
UPF2-203ENST00000397053 FASNP49327 2511 aaKnown RBP5.57□□□□□ -1.52
UPF2-203ENST00000397053 SETD2Q9BYW2 2564 aaPredicted RBP5.57□□□□□ -1.52
UPF2-203ENST00000397053 TRAV26-1A0A087WT03 109 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 GATA1P15976 413 aaPredicted RBP5.56□□□□□ -1.52
UPF2-203ENST00000397053 PARP14Q460N5 1801 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 C16orf54Q6UWD8 224 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 COL11A1P12107 1806 aaPredicted RBP5.56□□□□□ -1.52
UPF2-203ENST00000397053 TMEM89A2RUT3 159 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 ZNF664Q8N3J9 261 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 WFDC11Q8NEX6 87 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.56□□□□□ -1.52
UPF2-203ENST00000397053 UBE2D1P51668 147 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 WDR90Q96KV7 1748 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 IGLV11-55A0A075B6I3 123 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 LOXL1Q08397 574 aaPredicted RBP5.56□□□□□ -1.52
UPF2-203ENST00000397053 TMEM263Q8WUH6 116 aaKnown RBP5.56□□□□□ -1.52
UPF2-203ENST00000397053 PKD1L2Q7Z442 2459 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 SMIM27A0A1W2PRY6 76 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 LECT2O14960 151 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 IGKV1-17P01599 117 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 CRYGDP07320 174 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 IGF2-ASQ6U949 168 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 IGFL2Q6UWQ7 119 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 NDUFA11Q86Y39 141 aa5.56□□□□□ -1.52
UPF2-203ENST00000397053 K7EIM0 57 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 LYL1P12980 280 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 IGLL1P15814 213 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 K7ERJ3 54 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 PSMB8P28062 276 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 C12orf74Q32Q52 190 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 FAM19A1Q7Z5A9 133 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 C11orf52Q96A22 123 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 C20orf144Q9BQM9 153 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 TAF1LQ8IZX4 1826 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 ZNF236Q9UL36 1845 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.55□□□□□ -1.52
UPF2-203ENST00000397053 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 KIR2DL5BA0A0G2JN68 375 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 KIR2DL5BA0A0G2JPC4 375 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 LY6G6CO95867 125 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 ASPHD1Q5U4P2 390 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 FAM222AQ5U5X8 452 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 KIR2DL5AQ8N109 375 aa5.55□□□□□ -1.52
UPF2-203ENST00000397053 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
UPF2-203ENST00000397053 PIEZO2Q9H5I5 2752 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 NPSP0C0P6 89 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 COX7BP24311 80 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 DAND5Q8N907 189 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 IGKV3D-7A0A0C4DH55 119 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 Q6ZVH6 145 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 C1orf147Q96MC9 270 aaPredicted RBP5.54□□□□□ -1.52
UPF2-203ENST00000397053 TECTAO75443 2155 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 BRCA1P38398 1863 aaKnown RBP5.54□□□□□ -1.52
UPF2-203ENST00000397053 IGLV2-18A0A075B6J9 118 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 USP17L23D6RBM5 183 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 TRBV12-3P01733 135 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 ACYP1P07311 99 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 C9orf85Q96MD7 179 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 GREB1Q4ZG55 1949 aa5.54□□□□□ -1.52
UPF2-203ENST00000397053 TRBV10-1A0A0K0K1A3 114 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 FAM110AQ9BQ89 295 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 LRRC37AA6NMS7 1700 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 PATJQ8NI35 1801 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 TRBV10-2A0A0K0K1G8 114 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 A0A1W2PPM0 123 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 I3L2K1 104 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 K7EP13 123 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 LINC01545Q5VT33 79 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 UFSP1Q6NVU6 142 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 POLR3KQ9Y2Y1 108 aaPredicted RBP5.53□□□□□ -1.52
UPF2-203ENST00000397053 LAMB2P55268 1798 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 ATAD5Q96QE3 1844 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 A4D1N5 150 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 RSPO1Q2MKA7 263 aaPredicted RBP5.53□□□□□ -1.52
UPF2-203ENST00000397053 LRRC75A-AS1Q8N1F1 130 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 K7EP34 96 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 M0R2N4 97 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 ZNF726P1Q15940 193 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 MSRB1Q9NZV6 116 aa5.53□□□□□ -1.52
UPF2-203ENST00000397053 PLXNA1Q9UIW2 1896 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 IGKV1D-37A0A075B6S9 117 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 C11orf53Q8IXP5 236 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 LYPD6BQ8NI32 183 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 RPL39P62891 51 aaKnown RBP5.52□□□□□ -1.53
UPF2-203ENST00000397053 LINC01620Q4KN68 170 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 SMIM9A6NGZ8 99 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 REG3AQ06141 175 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 LINC00269Q8N2A0 174 aa5.52□□□□□ -1.53
UPF2-203ENST00000397053 TNFRSF13BO14836 293 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms