RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 PRSS1P07477 247 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 NRACQ8N912 160 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 TAX1BP3O14907 124 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
SCNN1A-205ENST00000396966 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
SCNN1A-205ENST00000396966 HLA-DRB4P13762 266 aa12.71□□□□□ -0.37
SCNN1A-205ENST00000396966 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
SCNN1A-205ENST00000396966 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.37
SCNN1A-205ENST00000396966 WNK1Q9H4A3 2382 aa12.71□□□□□ -0.37
SCNN1A-205ENST00000396966 NMUP48645 174 aa12.71□□□□□ -0.38
SCNN1A-205ENST00000396966 UBE2V1Q13404 147 aa12.71□□□□□ -0.38
SCNN1A-205ENST00000396966 SPINK13Q1W4C9 94 aa12.71□□□□□ -0.38
SCNN1A-205ENST00000396966 CBY3A6NI87 242 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 ZNF256Q9Y2P7 627 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 SORL1Q92673 2214 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 GNRH2O43555 120 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 VAMP3Q15836 100 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 BOD1L2Q8IYS8 172 aa12.7□□□□□ -0.38
SCNN1A-205ENST00000396966 TRAV12-2A0A075B6T6 113 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 H3BMM0 161 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 SAP30O75446 220 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 ODF1Q14990 250 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 PCP2Q8IVA1 136 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 PHLDA3Q9Y5J5 127 aa12.69□□□□□ -0.38
SCNN1A-205ENST00000396966 A8MTW9 85 aa12.68□□□□□ -0.38
SCNN1A-205ENST00000396966 KRTAP10-3P60369 221 aa12.68□□□□□ -0.38
SCNN1A-205ENST00000396966 LAGE3Q14657 143 aa12.68□□□□□ -0.38
SCNN1A-205ENST00000396966 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
SCNN1A-205ENST00000396966 C14orf178Q8N769 122 aaPredicted RBP12.67□□□□□ -0.38
SCNN1A-205ENST00000396966 NSD1Q96L73 2696 aaPredicted RBP12.67□□□□□ -0.38
SCNN1A-205ENST00000396966 CD7P09564 240 aa12.67□□□□□ -0.38
SCNN1A-205ENST00000396966 SETXQ7Z333 2677 aaKnown RBP12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 HIVEP1P15822 2718 aa12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 HHLA3Q9XRX5 114 aa12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 PF4P02776 101 aa12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 MRAP2Q96G30 205 aa12.66□□□□□ -0.38
SCNN1A-205ENST00000396966 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
SCNN1A-205ENST00000396966 ZMAT4Q9H898 229 aa12.65□□□□□ -0.38
SCNN1A-205ENST00000396966 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
SCNN1A-205ENST00000396966 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.39
SCNN1A-205ENST00000396966 IGKV2D-26A0A0A0MRZ7 120 aa12.65□□□□□ -0.39
SCNN1A-205ENST00000396966 IGKCP01834 107 aa12.65□□□□□ -0.39
SCNN1A-205ENST00000396966 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
SCNN1A-205ENST00000396966 ODF3L2Q3SX64 289 aa12.64□□□□□ -0.39
SCNN1A-205ENST00000396966 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
SCNN1A-205ENST00000396966 TTTY13Q9BZ97 58 aa12.64□□□□□ -0.39
SCNN1A-205ENST00000396966 ATP5LO75964 103 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 IGLV1-51P01701 117 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 MGPP08493 103 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 RASL10AQ92737 203 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 SMIM2Q9BVW6 85 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 MUC4Q99102 2169 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 AMMECR1LQ6DCA0 310 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
SCNN1A-205ENST00000396966 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 DPM2O94777 84 aa12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 STHQ8IWL8 128 aa12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 SETD2Q9BYW2 2564 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 SEC11AP67812 179 aa12.62□□□□□ -0.39
SCNN1A-205ENST00000396966 IGHV3-16A0A0C4DH30 117 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 ZC2HC1BQ5TFG8 222 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 Q8N1Y9 231 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 TRGV11A0A075B6L2 103 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 SIVA1O15304 175 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 NXPH4O95158 308 aa12.61□□□□□ -0.39
SCNN1A-205ENST00000396966 HSD52Q0P140 79 aa12.6□□□□□ -0.39
SCNN1A-205ENST00000396966 LINC00482Q8N8I6 264 aa12.6□□□□□ -0.39
SCNN1A-205ENST00000396966 TRAV8-6A0A0B4J262 113 aa12.6□□□□□ -0.39
SCNN1A-205ENST00000396966 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
SCNN1A-205ENST00000396966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.59□□□□□ -0.39
SCNN1A-205ENST00000396966 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
SCNN1A-205ENST00000396966 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
SCNN1A-205ENST00000396966 A0A087WX48 190 aa12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 FAM110AQ9BQ89 295 aa12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
SCNN1A-205ENST00000396966 A6NDN8 102 aa12.57□□□□□ -0.4
SCNN1A-205ENST00000396966 INSP01308 110 aa12.57□□□□□ -0.4
SCNN1A-205ENST00000396966 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
SCNN1A-205ENST00000396966 JPT2Q9H910 190 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms