RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 C9orf85Q96MD7 179 aa11.07□□□□□ -0.64
CLTA-203ENST00000396603 PARLQ9H300 379 aa11.07□□□□□ -0.64
CLTA-203ENST00000396603 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
CLTA-203ENST00000396603 HERC1Q15751 4861 aa11.07□□□□□ -0.64
CLTA-203ENST00000396603 CIDEAO60543 219 aa11.06□□□□□ -0.64
CLTA-203ENST00000396603 RPS20P60866 119 aaKnown RBP11.06□□□□□ -0.64
CLTA-203ENST00000396603 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
CLTA-203ENST00000396603 MSRB1Q9NZV6 116 aa11.06□□□□□ -0.64
CLTA-203ENST00000396603 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
CLTA-203ENST00000396603 XGP55808 180 aa11.05□□□□□ -0.64
CLTA-203ENST00000396603 TIRAPP58753 221 aa11.05□□□□□ -0.64
CLTA-203ENST00000396603 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
CLTA-203ENST00000396603 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 P01737 135 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
CLTA-203ENST00000396603 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 FRZBQ92765 325 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 SMIM7Q9BQ49 75 aa11.04□□□□□ -0.64
CLTA-203ENST00000396603 TMSB15BA0A087X1C1 80 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 GRIFINA4D1Z8 144 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 ZNF727A8MUV8 499 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 A8MWV9 139 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 H3BVH4 76 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
CLTA-203ENST00000396603 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 GYPEP15421 78 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
CLTA-203ENST00000396603 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
CLTA-203ENST00000396603 ZFP82Q8N141 532 aa11.02□□□□□ -0.65
CLTA-203ENST00000396603 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
CLTA-203ENST00000396603 C19orf71A6NCJ1 209 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
CLTA-203ENST00000396603 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
CLTA-203ENST00000396603 PGPEP1LA6NFU8 196 aa11□□□□□ -0.65
CLTA-203ENST00000396603 CRYGDP07320 174 aa11□□□□□ -0.65
CLTA-203ENST00000396603 OR5AL1P0C617 328 aa11□□□□□ -0.65
CLTA-203ENST00000396603 GCSHP23434 173 aa11□□□□□ -0.65
CLTA-203ENST00000396603 Q5VSD8 79 aa11□□□□□ -0.65
CLTA-203ENST00000396603 RHODO00212 210 aa10.99□□□□□ -0.65
CLTA-203ENST00000396603 RS1O15537 224 aa10.99□□□□□ -0.65
CLTA-203ENST00000396603 KRTAP10-1P60331 282 aa10.99□□□□□ -0.65
CLTA-203ENST00000396603 RPL19P84098 196 aaKnown RBP10.99□□□□□ -0.65
CLTA-203ENST00000396603 LINC01556Q5JQF7 62 aa10.99□□□□□ -0.65
CLTA-203ENST00000396603 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
CLTA-203ENST00000396603 F2Z2F3 143 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 M0R381 172 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 SNAI2O43623 268 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 SPANXN1Q5VSR9 72 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 CFAP126Q5VTH2 177 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 FAM231DQ6ZW35 169 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 FER1L6-AS1Q8NA97 138 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
CLTA-203ENST00000396603 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
CLTA-203ENST00000396603 RPP21Q9H633 154 aaKnown RBP10.98□□□□□ -0.65
CLTA-203ENST00000396603 IGHV3-38A0A0C4DH36 116 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 K7EN84 100 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 GATA1P15976 413 aaPredicted RBP10.97□□□□□ -0.65
CLTA-203ENST00000396603 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
CLTA-203ENST00000396603 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 GATCO43716 136 aaKnown RBP10.96□□□□□ -0.65
CLTA-203ENST00000396603 CACNG7P62955 275 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 C15orf54Q8N8G6 183 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 TPPP3Q9BW30 176 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
CLTA-203ENST00000396603 NAT8Q9UHE5 227 aa10.96□□□□□ -0.65
CLTA-203ENST00000396603 DMBT1Q9UGM3 2413 aaPredicted RBP10.95□□□□□ -0.66
CLTA-203ENST00000396603 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 A8MWL6 223 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 PSCAO43653 123 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 IFITM2Q01629 132 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 RHOHQ15669 191 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 CT83Q5H943 113 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 SFRP2Q96HF1 295 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 MYCBP2O75592 4640 aa10.95□□□□□ -0.66
CLTA-203ENST00000396603 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLTA-203ENST00000396603 LAGE3Q14657 143 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 OR10AG1Q8NH19 301 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 AP1S3Q96PC3 154 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
CLTA-203ENST00000396603 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 C9JQL5 133 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 IGLC6P0CF74 106 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
CLTA-203ENST00000396603 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms