RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 POM121L12Q8N7R1 296 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 MXRA5Q9NR99 2828 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 FHL3Q13643 280 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 COX8AP10176 69 aa11.94□□□□□ -0.5
SNX6-202ENST00000396526 RPL32P62910 135 aaKnown RBP11.94□□□□□ -0.5
SNX6-202ENST00000396526 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
SNX6-202ENST00000396526 CSMD2Q7Z408 3487 aa11.94□□□□□ -0.5
SNX6-202ENST00000396526 A8MTW9 85 aa11.94□□□□□ -0.5
SNX6-202ENST00000396526 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
SNX6-202ENST00000396526 DPM2O94777 84 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 STHQ8IWL8 128 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 H7C1H1 209 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 IGKCP01834 107 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 AGRNO00468 2067 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
SNX6-202ENST00000396526 ZNF415Q09FC8 603 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 LINC01587Q99440 93 aa11.93□□□□□ -0.5
SNX6-202ENST00000396526 INSP01308 110 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 NDUFA7O95182 113 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 TMEM208Q9BTX3 173 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 JPT2Q9H910 190 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 ODF1Q14990 250 aa11.92□□□□□ -0.5
SNX6-202ENST00000396526 LINC00315P59091 139 aa11.91□□□□□ -0.5
SNX6-202ENST00000396526 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
SNX6-202ENST00000396526 KMT2BQ9UMN6 2715 aaPredicted RBP11.91□□□□□ -0.5
SNX6-202ENST00000396526 C2orf66Q6UXQ4 117 aa11.91□□□□□ -0.5
SNX6-202ENST00000396526 TRPT1Q86TN4 253 aaKnown RBP11.91□□□□□ -0.5
SNX6-202ENST00000396526 TOMM6Q96B49 74 aa11.91□□□□□ -0.5
SNX6-202ENST00000396526 CLUHP3Q96NS8 147 aa11.91□□□□□ -0.5
SNX6-202ENST00000396526 STPG4Q8N801 248 aa11.9□□□□□ -0.5
SNX6-202ENST00000396526 ZNF256Q9Y2P7 627 aaPredicted RBP11.9□□□□□ -0.51
SNX6-202ENST00000396526 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 SAP30O75446 220 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 PLNP26678 52 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 NMUP48645 174 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 ZMAT5Q9UDW3 170 aaKnown RBP11.89□□□□□ -0.51
SNX6-202ENST00000396526 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 A0A087WX48 190 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 A8MWV9 139 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 MTORP42345 2549 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 MUC4Q99102 2169 aa11.89□□□□□ -0.51
SNX6-202ENST00000396526 M0R2P5 195 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 ERASQ7Z444 233 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 SPXQ9BT56 116 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 NOTCH2Q04721 2471 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 CRYGDP07320 174 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 ZNF124Q15973 351 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 HIST2H2BDQ6DRA6 164 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
SNX6-202ENST00000396526 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
SNX6-202ENST00000396526 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
SNX6-202ENST00000396526 TENM4Q6N022 2769 aa11.87□□□□□ -0.51
SNX6-202ENST00000396526 NSUN5P1Q3KNT7 163 aa11.87□□□□□ -0.51
SNX6-202ENST00000396526 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
SNX6-202ENST00000396526 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
SNX6-202ENST00000396526 F8VRH5 84 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 DLEU1O43261 78 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 LY6G6DO95868 133 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
SNX6-202ENST00000396526 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
SNX6-202ENST00000396526 CHTOPQ9Y3Y2 248 aaKnown RBP11.86□□□□□ -0.51
SNX6-202ENST00000396526 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 M0QY20 66 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 SIVA1O15304 175 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 ZFHX3Q15911 3703 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 RHODO00212 210 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 BOD1L2Q8IYS8 172 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 PROK1P58294 105 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
SNX6-202ENST00000396526 PTH2Q96A98 100 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 TMEM141Q96I45 108 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
SNX6-202ENST00000396526 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
SNX6-202ENST00000396526 RHOHQ15669 191 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 TCTAP57738 103 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 SMR3AQ99954 134 aa11.84□□□□□ -0.51
SNX6-202ENST00000396526 ITPR2Q14571 2701 aa11.83□□□□□ -0.52
SNX6-202ENST00000396526 PF4P02776 101 aa11.83□□□□□ -0.52
SNX6-202ENST00000396526 TP53TG1Q9Y2A0 90 aa11.83□□□□□ -0.52
SNX6-202ENST00000396526 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
SNX6-202ENST00000396526 I3L3M4 83 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms