RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 M0R381 172 aa12.22□□□□□ -0.45
FXN-203ENST00000396366 BCL2L11O43521 198 aa12.22□□□□□ -0.45
FXN-203ENST00000396366 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
FXN-203ENST00000396366 TCEAL7Q9BRU2 100 aa12.22□□□□□ -0.45
FXN-203ENST00000396366 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
FXN-203ENST00000396366 A0A0D9SG52 128 aa12.21□□□□□ -0.45
FXN-203ENST00000396366 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
FXN-203ENST00000396366 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.45
FXN-203ENST00000396366 UMAD1C9J7I0 102 aa12.21□□□□□ -0.45
FXN-203ENST00000396366 GCSHP23434 173 aa12.21□□□□□ -0.45
FXN-203ENST00000396366 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
FXN-203ENST00000396366 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
FXN-203ENST00000396366 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
FXN-203ENST00000396366 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
FXN-203ENST00000396366 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
FXN-203ENST00000396366 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
FXN-203ENST00000396366 CCL20P78556 96 aa12.19□□□□□ -0.46
FXN-203ENST00000396366 TMUB2Q71RG4 321 aa12.19□□□□□ -0.46
FXN-203ENST00000396366 IGLV5-52A0A0A0MRZ9 124 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 RHODO00212 210 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 HAMPP81172 84 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 WFDC2Q14508 124 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 Q8N814 137 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
FXN-203ENST00000396366 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
FXN-203ENST00000396366 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
FXN-203ENST00000396366 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
FXN-203ENST00000396366 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 PFDN1O60925 122 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
FXN-203ENST00000396366 LAGE3Q14657 143 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 OR10AG1Q8NH19 301 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
FXN-203ENST00000396366 A0A087WWC5 75 aa12.15□□□□□ -0.46
FXN-203ENST00000396366 SMR3BP02814 79 aaPredicted RBP12.15□□□□□ -0.46
FXN-203ENST00000396366 PRR27Q6MZM9 219 aa12.15□□□□□ -0.46
FXN-203ENST00000396366 LECT2O14960 151 aa12.14□□□□□ -0.47
FXN-203ENST00000396366 SSTP61278 116 aa12.14□□□□□ -0.47
FXN-203ENST00000396366 DERL1Q9BUN8 251 aa12.14□□□□□ -0.47
FXN-203ENST00000396366 RPL35P42766 123 aaKnown RBP12.13□□□□□ -0.47
FXN-203ENST00000396366 EIF5AP63241 154 aaKnown RBP12.13□□□□□ -0.47
FXN-203ENST00000396366 NIT1Q86X76 327 aa12.13□□□□□ -0.47
FXN-203ENST00000396366 NTN5Q8WTR8 489 aaPredicted RBP12.13□□□□□ -0.47
FXN-203ENST00000396366 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
FXN-203ENST00000396366 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
FXN-203ENST00000396366 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
FXN-203ENST00000396366 UBE2D3P61077 147 aa12.12□□□□□ -0.47
FXN-203ENST00000396366 UBE2D2P62837 147 aa12.12□□□□□ -0.47
FXN-203ENST00000396366 Q5VSD8 79 aa12.12□□□□□ -0.47
FXN-203ENST00000396366 SSBP4Q9BWG4 385 aaPredicted RBP12.12□□□□□ -0.47
FXN-203ENST00000396366 FAM30AQ9NZY2 134 aa12.12□□□□□ -0.47
FXN-203ENST00000396366 TRBV10-1A0A0K0K1A3 114 aa12.11□□□□□ -0.47
FXN-203ENST00000396366 KLK12Q9UKR0 248 aa12.11□□□□□ -0.47
FXN-203ENST00000396366 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
FXN-203ENST00000396366 TRBV7-3A0A075B6L6 115 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 SNAI2O43623 268 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 RAB4BP61018 213 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
FXN-203ENST00000396366 ZNF56Q15929 161 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
FXN-203ENST00000396366 URGCP-MRPS24S4R325 110 aa12.1□□□□□ -0.47
FXN-203ENST00000396366 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 CXCL1P09341 107 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 GZMBP10144 247 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 TOR2AQ5JU69 321 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 MANBALQ9NQG1 85 aa12.09□□□□□ -0.47
FXN-203ENST00000396366 RAB19A4D1S5 217 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 OR5AL1P0C617 328 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 FRZBQ92765 325 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 C11orf52Q96A22 123 aa12.08□□□□□ -0.48
FXN-203ENST00000396366 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
FXN-203ENST00000396366 F5H697 171 aa12.07□□□□□ -0.48
FXN-203ENST00000396366 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
FXN-203ENST00000396366 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
FXN-203ENST00000396366 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
FXN-203ENST00000396366 IGKV2D-24A0A075B6R9 120 aa12.06□□□□□ -0.48
FXN-203ENST00000396366 A0A087WX48 190 aa12.06□□□□□ -0.48
FXN-203ENST00000396366 RBFOX3A6NFN3 312 aa12.06□□□□□ -0.48
FXN-203ENST00000396366 UBE2WQ96B02 151 aa12.06□□□□□ -0.48
FXN-203ENST00000396366 HERC1Q15751 4861 aa12.06□□□□□ -0.48
FXN-203ENST00000396366 TRBV6-8A0A0A6YYG3 113 aa12.05□□□□□ -0.48
FXN-203ENST00000396366 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
FXN-203ENST00000396366 SULT1A2P50226 295 aa12.05□□□□□ -0.48
FXN-203ENST00000396366 RAB5CP51148 216 aa12.05□□□□□ -0.48
FXN-203ENST00000396366 LINC01620Q4KN68 170 aa12.05□□□□□ -0.48
FXN-203ENST00000396366 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
FXN-203ENST00000396366 TPPP3Q9BW30 176 aa12.04□□□□□ -0.48
FXN-203ENST00000396366 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
FXN-203ENST00000396366 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
FXN-203ENST00000396366 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms