RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
UPK3A-202ENST00000396082 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 ALKAL2Q6UX46 152 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
UPK3A-202ENST00000396082 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
UPK3A-202ENST00000396082 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 VAX2Q9UIW0 290 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
UPK3A-202ENST00000396082 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
UPK3A-202ENST00000396082 LELP1Q5T871 98 aa11.88□□□□□ -0.51
UPK3A-202ENST00000396082 OR10AG1Q8NH19 301 aa11.88□□□□□ -0.51
UPK3A-202ENST00000396082 TNFRSF18Q9Y5U5 241 aa11.88□□□□□ -0.51
UPK3A-202ENST00000396082 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
UPK3A-202ENST00000396082 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
UPK3A-202ENST00000396082 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 SSTP61278 116 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 Q6ZRN7 208 aaPredicted RBP11.86□□□□□ -0.51
UPK3A-202ENST00000396082 SMIM12Q96EX1 92 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
UPK3A-202ENST00000396082 EREGO14944 169 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 SNAI2O43623 268 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 NKX2-5P52952 324 aaPredicted RBP11.85□□□□□ -0.51
UPK3A-202ENST00000396082 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 ZNF56Q15929 161 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 PKD1P98161 4303 aa11.85□□□□□ -0.51
UPK3A-202ENST00000396082 A0A1B0GVG6 124 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 P01737 135 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 IGHV3-30-3P0DP02 117 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
UPK3A-202ENST00000396082 SSBP4Q9BWG4 385 aaPredicted RBP11.84□□□□□ -0.51
UPK3A-202ENST00000396082 Q9UF83 564 aa11.84□□□□□ -0.51
UPK3A-202ENST00000396082 DNAH11Q96DT5 4516 aa11.83□□□□□ -0.52
UPK3A-202ENST00000396082 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
UPK3A-202ENST00000396082 RPL36AP83881 106 aaKnown RBP11.83□□□□□ -0.52
UPK3A-202ENST00000396082 RPL36ALQ969Q0 106 aaKnown RBP11.83□□□□□ -0.52
UPK3A-202ENST00000396082 DYNC1H1Q14204 4646 aaKnown RBP11.82□□□□□ -0.52
UPK3A-202ENST00000396082 A0A087WWC5 75 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 F5H697 171 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 GZMBP10144 247 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 FER1L6-AS1Q8NA97 138 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
UPK3A-202ENST00000396082 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
UPK3A-202ENST00000396082 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
UPK3A-202ENST00000396082 PSCAO43653 123 aa11.81□□□□□ -0.52
UPK3A-202ENST00000396082 RAB4BP61018 213 aa11.81□□□□□ -0.52
UPK3A-202ENST00000396082 Q9HAA7 133 aa11.81□□□□□ -0.52
UPK3A-202ENST00000396082 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
UPK3A-202ENST00000396082 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
UPK3A-202ENST00000396082 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
UPK3A-202ENST00000396082 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
UPK3A-202ENST00000396082 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
UPK3A-202ENST00000396082 URGCP-MRPS24S4R325 110 aa11.79□□□□□ -0.52
UPK3A-202ENST00000396082 KIAA1109Q2LD37 5005 aa11.78□□□□□ -0.52
UPK3A-202ENST00000396082 A0A087WTM6 91 aa11.78□□□□□ -0.52
UPK3A-202ENST00000396082 CEBPGP53567 150 aa11.78□□□□□ -0.52
UPK3A-202ENST00000396082 CACNG7P62955 275 aa11.78□□□□□ -0.52
UPK3A-202ENST00000396082 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
UPK3A-202ENST00000396082 TMEM250H0YL14 139 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 MGPP08493 103 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 UBE2D3P61077 147 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 UBE2D2P62837 147 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 TOR2AQ5JU69 321 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 Q8N3U1 123 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 OR10G8Q8NGN5 311 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
UPK3A-202ENST00000396082 F2Z2F3 143 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 LAGE3Q14657 143 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 NUDT10Q8NFP7 164 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 EIF5A2Q9GZV4 153 aaKnown RBP11.76□□□□□ -0.53
UPK3A-202ENST00000396082 HERC2O95714 4834 aa11.76□□□□□ -0.53
UPK3A-202ENST00000396082 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
UPK3A-202ENST00000396082 RNASE7Q9H1E1 156 aaKnown RBP11.75□□□□□ -0.53
UPK3A-202ENST00000396082 RPP21Q9H633 154 aaKnown RBP11.75□□□□□ -0.53
UPK3A-202ENST00000396082 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
UPK3A-202ENST00000396082 K7EN84 100 aa11.74□□□□□ -0.53
UPK3A-202ENST00000396082 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
UPK3A-202ENST00000396082 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
UPK3A-202ENST00000396082 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
UPK3A-202ENST00000396082 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
UPK3A-202ENST00000396082 A0A087WX48 190 aa11.73□□□□□ -0.53
UPK3A-202ENST00000396082 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
UPK3A-202ENST00000396082 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms