RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
CCDC142-202ENST00000393965 MUC4Q99102 2169 aa10.34□□□□□ -0.75
CCDC142-202ENST00000393965 PRM2P04554 102 aa10.34□□□□□ -0.75
CCDC142-202ENST00000393965 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
CCDC142-202ENST00000393965 CEND1Q8N111 149 aa10.34□□□□□ -0.75
CCDC142-202ENST00000393965 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
CCDC142-202ENST00000393965 SOCS3O14543 225 aa10.34□□□□□ -0.75
CCDC142-202ENST00000393965 LINC01549A6NIU2 74 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 PPBPP02775 128 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 RAB9AP51151 201 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 RAX2Q96IS3 184 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
CCDC142-202ENST00000393965 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 Q8N8P6 123 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
CCDC142-202ENST00000393965 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 NDUFS8O00217 210 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 CD7P09564 240 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 PLEKHB2Q96CS7 222 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
CCDC142-202ENST00000393965 A0A096LNT2 108 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 G3V4G9 280 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 ATP5LO75964 103 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 C9orf47Q6ZRZ4 202 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 B4DSR2 109 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 IGLL5B9A064 214 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
CCDC142-202ENST00000393965 PRSS29PA6NIE9 313 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 NDUFA4O00483 81 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 CFHR3Q02985 330 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 ASIPP42127 132 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
CCDC142-202ENST00000393965 Q1RN00 199 aa10.31□□□□□ -0.76
CCDC142-202ENST00000393965 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 ZNF56Q15929 161 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 KHDC1LQ5JSQ8 128 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 GAGE13Q4V321 117 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 HELZ2Q9BYK8 2649 aaKnown RBP10.3□□□□□ -0.76
CCDC142-202ENST00000393965 TMEM190Q8WZ59 177 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 C20orf78Q9BR46 151 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
CCDC142-202ENST00000393965 FLNAP21333 2647 aaKnown RBP10.29□□□□□ -0.76
CCDC142-202ENST00000393965 PRSS2P07478 247 aa10.29□□□□□ -0.76
CCDC142-202ENST00000393965 TP53TG1Q9Y2A0 90 aa10.29□□□□□ -0.76
CCDC142-202ENST00000393965 OR5A1Q8NGJ0 315 aa10.29□□□□□ -0.76
CCDC142-202ENST00000393965 C18orf65Q6ZTR6 163 aa10.29□□□□□ -0.76
CCDC142-202ENST00000393965 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
CCDC142-202ENST00000393965 C9orf139Q6ZV77 190 aa10.28□□□□□ -0.76
CCDC142-202ENST00000393965 NRACQ8N912 160 aa10.28□□□□□ -0.76
CCDC142-202ENST00000393965 A0A087WX48 190 aa10.28□□□□□ -0.76
CCDC142-202ENST00000393965 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
CCDC142-202ENST00000393965 RASL10AQ92737 203 aa10.27□□□□□ -0.76
CCDC142-202ENST00000393965 H7C1H1 209 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 PSMG4Q5JS54 123 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 FAM159AQ6UWV7 190 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
CCDC142-202ENST00000393965 PSMB8P28062 276 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 SIGMAR1Q99720 223 aa10.27□□□□□ -0.77
CCDC142-202ENST00000393965 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 F8VRH5 84 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 MYMXA0A1B0GTQ4 84 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 GAGE12HA6NDE8 117 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
CCDC142-202ENST00000393965 Q96MF0 132 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 ITPR2Q14571 2701 aa10.26□□□□□ -0.77
CCDC142-202ENST00000393965 HECTD1Q9ULT8 2610 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 HIVEP2P31629 2446 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 DAZ1Q9NQZ3 744 aaKnown RBP10.25□□□□□ -0.77
CCDC142-202ENST00000393965 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CCDC142-202ENST00000393965 C11orf44Q8N8P7 122 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 SMPXQ9UHP9 88 aa10.25□□□□□ -0.77
CCDC142-202ENST00000393965 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 C11orf86A6NJI1 115 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 FOXI2Q6ZQN5 318 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 LGALS1P09382 135 aaKnown RBP10.24□□□□□ -0.77
CCDC142-202ENST00000393965 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 BAALCQ8WXS3 180 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 J3QR89 54 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 ZNF580Q9UK33 172 aa10.24□□□□□ -0.77
CCDC142-202ENST00000393965 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
CCDC142-202ENST00000393965 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms