RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 DPH3P1Q9H4G8 78 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 TRAV12-3A0A0B4J271 114 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 EDN2P20800 178 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 HERVK_113P61574 105 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 SPXQ9BT56 116 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 CCL21O00585 134 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 A8MZ25 164 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 ZNF56Q15929 161 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 SLC50A1Q9BRV3 221 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 ZFAND3Q9H8U3 227 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 PRO1854Q9UHT4 67 aa12.4□□□□□ -0.42
PHTF1-205ENST00000393357 MUC4Q99102 2169 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 CRYGDP07320 174 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 CD7P09564 240 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 ZFP36P26651 326 aaKnown RBP12.39□□□□□ -0.43
PHTF1-205ENST00000393357 ERG28Q9UKR5 140 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 RBAKDNA6NC62 111 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 CEMP1Q6PRD7 247 aaPredicted RBP12.39□□□□□ -0.43
PHTF1-205ENST00000393357 DAND5Q8N907 189 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
PHTF1-205ENST00000393357 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 Q8N9W7 124 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 HIVEP3Q5T1R4 2406 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 TSHBP01222 138 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 CDSNQ15517 529 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 MUSTN1Q8IVN3 82 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
PHTF1-205ENST00000393357 J3QQQ9 107 aa12.37□□□□□ -0.43
PHTF1-205ENST00000393357 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
PHTF1-205ENST00000393357 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
PHTF1-205ENST00000393357 UBE2D1P51668 147 aa12.37□□□□□ -0.43
PHTF1-205ENST00000393357 NPBQ8NG41 125 aa12.37□□□□□ -0.43
PHTF1-205ENST00000393357 RNF5Q99942 180 aa12.37□□□□□ -0.43
PHTF1-205ENST00000393357 SAA4P35542 130 aa12.36□□□□□ -0.43
PHTF1-205ENST00000393357 GAGE5Q13069 117 aa12.36□□□□□ -0.43
PHTF1-205ENST00000393357 GAGE6Q13070 117 aa12.36□□□□□ -0.43
PHTF1-205ENST00000393357 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
PHTF1-205ENST00000393357 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
PHTF1-205ENST00000393357 KLK9Q9UKQ9 250 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 PRM2P04554 102 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 IGLV4-69A0A075B6H9 119 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 TRAV8-3A0A0A6YYJ7 113 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 HERV-K104P63124 156 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
PHTF1-205ENST00000393357 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
PHTF1-205ENST00000393357 IGHV3-30P01768 117 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 IGHV3-30-5P0DP03 117 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 UBE2D3P61077 147 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 UBE2D2P62837 147 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 CLEC2BQ92478 149 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 PMVKQ15126 192 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 Q8N1Y9 231 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 SVIPQ8NHG7 77 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 EEF1AKMT3Q96AZ1 226 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
PHTF1-205ENST00000393357 PRRC2AP48634 2157 aaKnown RBP12.34□□□□□ -0.43
PHTF1-205ENST00000393357 PF4V1P10720 104 aa12.33□□□□□ -0.43
PHTF1-205ENST00000393357 COX6B1P14854 86 aa12.33□□□□□ -0.44
PHTF1-205ENST00000393357 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.44
PHTF1-205ENST00000393357 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
PHTF1-205ENST00000393357 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
PHTF1-205ENST00000393357 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
PHTF1-205ENST00000393357 CELSR2Q9HCU4 2923 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 COX8CQ7Z4L0 72 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 P0DMU3 169 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 Q8NA96 180 aa12.32□□□□□ -0.44
PHTF1-205ENST00000393357 RS1O15537 224 aa12.31□□□□□ -0.44
PHTF1-205ENST00000393357 RNASE3P12724 160 aaKnown RBP12.31□□□□□ -0.44
PHTF1-205ENST00000393357 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
PHTF1-205ENST00000393357 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
PHTF1-205ENST00000393357 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
PHTF1-205ENST00000393357 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
PHTF1-205ENST00000393357 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 GPHB5Q86YW7 130 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
PHTF1-205ENST00000393357 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
PHTF1-205ENST00000393357 IGFL3Q6UXB1 125 aa12.29□□□□□ -0.44
PHTF1-205ENST00000393357 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
PHTF1-205ENST00000393357 SLC25A29Q8N8R3 303 aa12.29□□□□□ -0.44
PHTF1-205ENST00000393357 ATP6V0E2Q8NHE4 81 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 GAGE12JA6NER3 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 GAGE7O76087 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
PHTF1-205ENST00000393357 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms