RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 ADGRB1O14514 1584 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 YKT6O15498 198 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 CFAP126Q5VTH2 177 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 C3orf33Q6P1S2 294 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 IFI27L1Q96BM0 104 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 GUCA1BQ9UMX6 200 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 NUBP2Q9Y5Y2 271 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 DLC1Q96QB1 1528 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 MYH1P12882 1939 aa-3.66□□□□□ -3
SNORA40-201ENST00000388090 PARP14Q460N5 1801 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 HMGB3O15347 200 aaKnown RBP-3.67□□□□□ -3
SNORA40-201ENST00000388090 SLC25A4P12235 298 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 AP3S1Q92572 193 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 LXNQ9BS40 222 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 USE1Q9NZ43 259 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 MED11Q9P086 117 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 ANKRD31Q8N7Z5 1873 aa-3.67□□□□□ -3
SNORA40-201ENST00000388090 J3KT08 172 aa-3.68□□□□□ -3
SNORA40-201ENST00000388090 IFNA6P05013 189 aa-3.68□□□□□ -3
SNORA40-201ENST00000388090 OGNP20774 298 aaKnown RBP-3.68□□□□□ -3
SNORA40-201ENST00000388090 OR5H6Q8NGV6 325 aa-3.68□□□□□ -3
SNORA40-201ENST00000388090 IL20Q9NYY1 176 aa-3.68□□□□□ -3
SNORA40-201ENST00000388090 EDDM3BP56851 147 aa-3.69□□□□□ -3
SNORA40-201ENST00000388090 CCDC122Q5T0U0 273 aa-3.69□□□□□ -3
SNORA40-201ENST00000388090 NDUFA11Q86Y39 141 aa-3.69□□□□□ -3
SNORA40-201ENST00000388090 FAM9CQ8IZT9 166 aa-3.69□□□□□ -3
SNORA40-201ENST00000388090 NEK7Q8TDX7 302 aa-3.69□□□□□ -3
SNORA40-201ENST00000388090 CHMP4BQ9H444 224 aaKnown RBP-3.69□□□□□ -3
SNORA40-201ENST00000388090 NSD3Q9BZ95 1437 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 NBEAQ8NFP9 2946 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 CCDC168Q8NDH2 2452 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 TCOF1Q13428 1488 aaKnown RBP-3.7□□□□□ -3
SNORA40-201ENST00000388090 ARF6P62330 175 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 PRELID3AQ96N28 172 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 CCDC144AA2RUR9 1427 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 UHRF1BP1Q6BDS2 1440 aa-3.7□□□□□ -3
SNORA40-201ENST00000388090 PTPRMP28827 1452 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 MAP3K5Q99683 1374 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 IGHV1-24A0A0C4DH33 117 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 TPM2P07951 284 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 BLCAPP62952 87 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 SIGMAR1Q99720 223 aa-3.71□□□□□ -3
SNORA40-201ENST00000388090 MTORP42345 2549 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 NCR2O95944 276 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 NCALDP61601 193 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 TMEM97Q5BJF2 176 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 MORN4Q8NDC4 146 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 BRK1Q8WUW1 75 aa-3.72□□□□□ -3
SNORA40-201ENST00000388090 AKR1D1P51857 326 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 SCGB2B2Q4G0G5 96 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 C9orf62Q8N4C0 152 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 OTOSQ8NHW6 89 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 OTORQ9NRC9 128 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 PYCARDQ9ULZ3 195 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 UTP20O75691 2785 aaKnown RBP-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 GAPVD1Q14C86 1478 aa-3.73□□□□□ -3.01
SNORA40-201ENST00000388090 ERICH2A1L162 156 aa-3.74□□□□□ -3.01
SNORA40-201ENST00000388090 SLC25A6P12236 298 aa-3.74□□□□□ -3.01
SNORA40-201ENST00000388090 TROQ12816 1431 aaPredicted RBP-3.74□□□□□ -3.01
SNORA40-201ENST00000388090 FAM135BQ49AJ0 1406 aa-3.74□□□□□ -3.01
SNORA40-201ENST00000388090 TRAPPC8Q9Y2L5 1435 aa-3.74□□□□□ -3.01
SNORA40-201ENST00000388090 ADGBQ8N7X0 1667 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 DNAH7Q8WXX0 4024 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 CKS2P33552 79 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 RTL8BQ17RB0 113 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 OR51A4Q8NGJ6 313 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 MAFIPQ8WZ33 124 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 RTL8AQ9BWD3 113 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 ITPR1Q14643 2758 aa-3.75□□□□□ -3.01
SNORA40-201ENST00000388090 IBTKQ9P2D0 1353 aaPredicted RBP-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 ADAMTS12P58397 1594 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 TRAV16A0A0A6YYK6 109 aaPredicted RBP-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 RIIAD1A6NNX1 92 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 CYBAP13498 195 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 RPL19P84098 196 aaKnown RBP-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 LRTM1Q9HBL6 345 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 LAMTOR3Q9UHA4 124 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 NDUFAF1Q9Y375 327 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 COL4A6Q14031 1691 aa-3.76□□□□□ -3.01
SNORA40-201ENST00000388090 PTPN23Q9H3S7 1636 aa-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 H3BQV1 296 aa-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 NDUFC2O95298 119 aa-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 FABP2P12104 132 aa-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 BAGE3Q86Y29 109 aa-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 PAIP2Q9BPZ3 127 aaKnown RBP-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 GCN1Q92616 2671 aaKnown RBP-3.77□□□□□ -3.01
SNORA40-201ENST00000388090 FAM25EA8MYX2 175 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 TMEM114B3SHH9 223 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 HSBP1L1C9JCN9 74 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 H0YJX3 145 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 H3BNG1 76 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 TPM1P09493 284 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 SPCS2Q15005 226 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 SLC25A26Q70HW3 274 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 CARD19Q96LW7 228 aa-3.78□□□□□ -3.01
SNORA40-201ENST00000388090 REV3LO60673 3130 aa-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 TRAV12-3A0A0B4J271 114 aa-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 MAP1LC3B2A6NCE7 125 aa-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 AIPO00170 330 aa-3.79□□□□□ -3.02
SNORA40-201ENST00000388090 HSPE1P61604 102 aaKnown RBP-3.79□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms