RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TAX1BP3O14907 124 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RGS16O15492 202 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 DHFRP00374 187 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 IL3P08700 152 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 FABP2P12104 132 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RAB4AP20338 218 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 MSNP26038 577 aaKnown RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RAB28P51157 221 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 DAPP51397 102 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 FXYD2P54710 66 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 EDDM3BP56851 147 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 C21orf59P57076 290 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 MAGOHP61326 146 aaKnown RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 AP1S1P61966 158 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 Q0VG73 95 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 CARTPTQ16568 116 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 LTC4SQ16873 150 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 IAH1Q2TAA2 248 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 OGFRL1Q5TC84 451 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 NCBP2-AS2Q69YL0 99 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 ALKAL2Q6UX46 152 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 GBP6Q6ZN66 633 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 LINC00305Q7Z4B0 112 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 SLC30A8Q8IWU4 369 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 KCNRGQ8N5I3 272 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 UBL4BQ8N7F7 174 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR1L6Q8NGR2 347 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR13C2Q8NGS9 318 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 C11orf40Q8WZ69 217 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RAB1CQ92928 201 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 TSLPQ969D9 159 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 MAGOHBQ96A72 148 aaKnown RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 PAGE5Q96GU1 130 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 ARL5BQ96KC2 179 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 HYLS1Q96M11 299 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 BIRC8Q96P09 236 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 CIB1Q99828 191 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 CXorf21Q9HAI6 301 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 GCNT4Q9P109 453 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 RABL2AQ9UBK7 228 aaPredicted RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 DNAJC12Q9UKB3 198 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 PSME2Q9UL46 239 aa-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 MRPS7Q9Y2R9 242 aaKnown RBP-2.26□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR5H14A6NHG9 310 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 I3L4J1 428 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM50AO95807 157 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 NPYP01303 97 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 ARMS2P0C7Q2 107 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 UBCP0CG48 685 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 RALBP11234 206 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 CALB2P22676 271 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 DDTP30046 118 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCND2P30279 289 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 SULT1E1P49888 294 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 RPL23AP62750 156 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 MAPRE1Q15691 268 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 PSMD5Q16401 504 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 LINC01590Q5TEZ4 76 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 TTC33Q6PID6 262 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 DPPA2Q7Z7J5 298 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 CNPY4Q8N129 248 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 PQLC3Q8N755 202 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 ATP6V1C2Q8NEY4 427 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR5H6Q8NGV6 325 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR2T35Q8NGX2 323 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 SVIPQ8NHG7 77 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 CCL17Q92583 94 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 ISOC2Q96AB3 205 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 RAB37Q96AX2 223 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 ERP27Q96DN0 273 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 C19orf60Q96EN9 201 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 ABHD14BQ96IU4 210 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 C7orf34Q96L11 122 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 MRPL13Q9BYD1 178 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR51M1Q9H341 326 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 C6orf48Q9UBA6 75 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 STX8Q9UNK0 236 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 C14orf166Q9Y224 244 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 POMPQ9Y244 141 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 UTP11Q9Y3A2 253 aaKnown RBP-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 FANCIQ9NVI1 1328 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM94Q12767 1356 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 PIK3C2GO75747 1445 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRAPPC8Q9Y2L5 1435 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 EFCAB6Q5THR3 1501 aa-2.27□□□□□ -2.77
RNU6-540P-201ENST00000384622 TOP2BQ02880 1626 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 DDX60LQ5H9U9 1706 aaKnown RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRAV27A0A087WT01 109 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM30CPA0ZSE6 113 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 TMEM218A2RU14 115 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 D6R8Y8 96 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 PGRMC1O00264 195 aaKnown RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 LEPROTO15243 131 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 SNNO75324 88 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 STK17BO94768 372 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 LEPROTL1O95214 131 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 NDUFC2O95298 119 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 SCGB1D1O95968 90 aa-2.28□□□□□ -2.77
RNU6-540P-201ENST00000384622 APOC3P02656 99 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms