RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 PDE6HQ13956 83 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
VLDLR-202ENST00000382099 PRAC2D3DTV9 90 aa11.46□□□□□ -0.57
VLDLR-202ENST00000382099 RHOHQ15669 191 aa11.46□□□□□ -0.57
VLDLR-202ENST00000382099 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
VLDLR-202ENST00000382099 S100A4P26447 101 aaKnown RBP11.46□□□□□ -0.58
VLDLR-202ENST00000382099 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.58
VLDLR-202ENST00000382099 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-202ENST00000382099 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 ZNF292O60281 2723 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 I3L2K1 104 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
VLDLR-202ENST00000382099 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 LINC00643Q86TS7 51 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 SMCR5Q8TEV8 140 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 CRYGDP07320 174 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
VLDLR-202ENST00000382099 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 TRGV5A0A0B4J1U4 118 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 Q9UFV3 132 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 C17orf100A8MU93 164 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 MRAPQ8TCY5 172 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
VLDLR-202ENST00000382099 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
VLDLR-202ENST00000382099 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
VLDLR-202ENST00000382099 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
VLDLR-202ENST00000382099 CRYGAP11844 174 aa11.43□□□□□ -0.58
VLDLR-202ENST00000382099 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
VLDLR-202ENST00000382099 J3QLI3 93 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 OXTP01178 125 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 UCNP55089 124 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 JPT2Q9H910 190 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 CUBNO60494 3623 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
VLDLR-202ENST00000382099 M0R1B8 84 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 ATOX1O00244 68 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 MRGPRG-AS1Q2M3A8 158 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 IGHV1-18A0A0C4DH31 117 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 K7EIM0 57 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
VLDLR-202ENST00000382099 TEX22C9J3V5 150 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 ATP5G1P05496 136 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 ACYP1P07311 99 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 TMEM258P61165 79 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 CCL8P80075 99 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 PEMTQ9UBM1 199 aa11.4□□□□□ -0.58
VLDLR-202ENST00000382099 LHBP01229 141 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 GFRALQ6UXV0 394 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 Q6ZT83 130 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
VLDLR-202ENST00000382099 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 OPRPNQ99935 248 aaPredicted RBP11.39□□□□□ -0.59
VLDLR-202ENST00000382099 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 ZNF580Q9UK33 172 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 PYGO1Q9Y3Y4 419 aa11.39□□□□□ -0.59
VLDLR-202ENST00000382099 TSHBP01222 138 aa11.38□□□□□ -0.59
VLDLR-202ENST00000382099 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
VLDLR-202ENST00000382099 I3L3M4 83 aa11.38□□□□□ -0.59
VLDLR-202ENST00000382099 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
VLDLR-202ENST00000382099 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 IGKV3D-7A0A0C4DH55 119 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 F5H697 171 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 LST1O00453 97 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 TMEM30BQ3MIR4 351 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 DEFB124Q8NES8 71 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 AMELXQ99217 191 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 Q5XG85 94 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
VLDLR-202ENST00000382099 FDCSPQ8NFU4 85 aa11.36□□□□□ -0.59
VLDLR-202ENST00000382099 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
VLDLR-202ENST00000382099 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
VLDLR-202ENST00000382099 SPANXDQ9BXN6 97 aa11.36□□□□□ -0.59
VLDLR-202ENST00000382099 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 MDS2Q8NDY4 140 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 CRYGBP07316 175 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 LEPROTO15243 131 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 COX7A1P24310 79 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 DEFB109BQ30KR1 87 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 SMAD5-AS1Q9Y6J3 95 aa11.35□□□□□ -0.59
VLDLR-202ENST00000382099 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
VLDLR-202ENST00000382099 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
VLDLR-202ENST00000382099 CD59P13987 128 aa11.34□□□□□ -0.59
VLDLR-202ENST00000382099 PFN2P35080 140 aa11.34□□□□□ -0.59
VLDLR-202ENST00000382099 SYNJ2BPP57105 145 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms