RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 IGHG4P01861 327 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 MYCNOSP40205 109 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 SLURP1P55000 103 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 H3BRN7 92 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 NTN3O00634 580 aaPredicted RBP4.45□□□□□ -1.7
RFC1-202ENST00000381897 PRM2P04554 102 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 FAM216BQ8N7L0 139 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 Q9H8V8 135 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 PHLDA3Q9Y5J5 127 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 KIAA2026Q5HYC2 2103 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 A0A1W2PPI3 338 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 CRPP02741 224 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 IGHV4-31P0DP07 118 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 C11orf53Q8IXP5 236 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 TMEM133Q9H2Q1 129 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 BOD1L1Q8NFC6 3051 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 VWC2LB2RUY7 222 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 K7ENP7 123 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 IGKV3-15P01624 115 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 GAFA1Q96PS6 74 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 PRO3102Q9H379 93 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 PRO1854Q9UHT4 67 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 LAMA5O15230 3695 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 TRAV21A0A0B4J279 112 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 WT1-ASQ06250 92 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 C10orf55Q5SWW7 151 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 C20orf78Q9BR46 151 aa4.45□□□□□ -1.7
RFC1-202ENST00000381897 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 LGALS1P09382 135 aaKnown RBP4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 LINC00311Q8N616 119 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 CCL17Q92583 94 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 PLEKHB2Q96CS7 222 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 NBEAQ8NFP9 2946 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGHV3-72A0A0B4J1Y9 119 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 GNLYP22749 145 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 CDIP1Q9H305 208 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGHV1-18A0A0C4DH31 117 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 INSP01308 110 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGHV4-39P01824 125 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 DNAJC13O75165 2243 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGKV2-40A0A087WW87 121 aaPredicted RBP4.44□□□□□ -1.7
RFC1-202ENST00000381897 IGKV2D-40P01614 121 aaPredicted RBP4.44□□□□□ -1.7
RFC1-202ENST00000381897 HILS1P60008 231 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 TMEM141Q96I45 108 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
RFC1-202ENST00000381897 CACNA1HO95180 2353 aa4.44□□□□□ -1.7
RFC1-202ENST00000381897 LOC100131303A0A0U1RQF7 123 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 LRP4O75096 1905 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 A0A087WW49 117 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 ACYP1P07311 99 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 Q0VFX4 171 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 PIP4P1Q86T03 277 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 LINC01356Q8N9X3 169 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 TP53TG1Q9Y2A0 90 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 ICE1Q9Y2F5 2266 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 IGHV3-49A0A0A0MS15 119 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 ATOX1O00244 68 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 BLCAPP62952 87 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 CFAP126Q5VTH2 177 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
RFC1-202ENST00000381897 C15orf53Q8NAA6 179 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 DPH3P1Q9H4G8 78 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 SIGLEC9Q9Y336 463 aa4.43□□□□□ -1.7
RFC1-202ENST00000381897 TTC28Q96AY4 2481 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 FHL2Q14192 279 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 ZNF56Q15929 161 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 Q8N1Y9 231 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 RITA1Q96K30 269 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 TTTY13Q9BZ97 58 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 POLEQ07864 2286 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 WISP2O76076 250 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 CCL3L1P16619 93 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 CCL8P80075 99 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 SPRR3Q9UBC9 169 aa4.42□□□□□ -1.7
RFC1-202ENST00000381897 DSPP15924 2871 aaKnown RBP4.42□□□□□ -1.7
RFC1-202ENST00000381897 IGKV1D-37A0A075B6S9 117 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 OVOL1O14753 267 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 FSHBP01225 129 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 ATP5G1P05496 136 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 LOXL1Q08397 574 aaPredicted RBP4.41□□□□□ -1.7
RFC1-202ENST00000381897 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 CLPSL1A2RUU4 121 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 RBAKDNA6NC62 111 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 PROP1O75360 226 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 IGHV1-69P01742 117 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 RNASE1P07998 156 aaKnown RBP4.41□□□□□ -1.7
RFC1-202ENST00000381897 ITLN2Q8WWU7 325 aaPredicted RBP4.41□□□□□ -1.7
RFC1-202ENST00000381897 DCHS1Q96JQ0 3298 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 C10orf105Q8TEF2 133 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 ARHGAP21Q5T5U3 1957 aa4.41□□□□□ -1.7
RFC1-202ENST00000381897 TNRC6BQ9UPQ9 1833 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms