RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 A0A087WWL8 130 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 A0A096LPF7 62 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 ICOSQ9Y6W8 199 aa11.23□□□□□ -0.61
SNRPB-201ENST00000381342 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
SNRPB-201ENST00000381342 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
SNRPB-201ENST00000381342 ISOC2Q96AB3 205 aa11.22□□□□□ -0.61
SNRPB-201ENST00000381342 RHODO00212 210 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 CIDEAO60543 219 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 GYPEP15421 78 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 CTRLP40313 264 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 RNF212Q495C1 297 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 Q6ZSN1 163 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
SNRPB-201ENST00000381342 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.62
SNRPB-201ENST00000381342 A0A1W2PPQ1 181 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 K7EQD1 137 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 CRYGDP07320 174 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
SNRPB-201ENST00000381342 SVBPQ8N300 66 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 MSRB1Q9NZV6 116 aa11.2□□□□□ -0.62
SNRPB-201ENST00000381342 TRBV6-4A0A1B0GX49 114 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 A8MWL6 223 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 APOC3P02656 99 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 CACNG7P62955 275 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 RHOHQ15669 191 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 CT83Q5H943 113 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 C15orf54Q8N8G6 183 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
SNRPB-201ENST00000381342 F2Z2F3 143 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 M0R2N4 97 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 SRIP30626 198 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
SNRPB-201ENST00000381342 C14orf178Q8N769 122 aaPredicted RBP11.18□□□□□ -0.62
SNRPB-201ENST00000381342 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 V9GYV3 84 aa11.18□□□□□ -0.62
SNRPB-201ENST00000381342 CCL18P55774 89 aa11.17□□□□□ -0.62
SNRPB-201ENST00000381342 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
SNRPB-201ENST00000381342 ZNF56Q15929 161 aa11.17□□□□□ -0.62
SNRPB-201ENST00000381342 ESRGQ1W209 222 aa11.17□□□□□ -0.62
SNRPB-201ENST00000381342 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
SNRPB-201ENST00000381342 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
SNRPB-201ENST00000381342 SNAPINO95295 136 aa11.16□□□□□ -0.62
SNRPB-201ENST00000381342 OR10G8Q8NGN5 311 aa11.16□□□□□ -0.62
SNRPB-201ENST00000381342 TSKUQ8WUA8 353 aa11.16□□□□□ -0.62
SNRPB-201ENST00000381342 Q9UF83 564 aa11.16□□□□□ -0.62
SNRPB-201ENST00000381342 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 NTF3P20783 257 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 RHEBQ15382 184 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 CLRN3Q8NCR9 226 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 KIF25-AS1Q9Y6Z4 181 aa11.15□□□□□ -0.62
SNRPB-201ENST00000381342 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
SNRPB-201ENST00000381342 MGPP08493 103 aa11.14□□□□□ -0.63
SNRPB-201ENST00000381342 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
SNRPB-201ENST00000381342 TWIST1Q15672 202 aa11.14□□□□□ -0.63
SNRPB-201ENST00000381342 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
SNRPB-201ENST00000381342 GAGE12JA6NER3 117 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 EVI2AP22794 236 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 LINC00315P59091 139 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 RAB4BP61018 213 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 GAGE1Q13065 139 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 GAGE4Q13068 117 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 GAGE5Q13069 117 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
SNRPB-201ENST00000381342 F5H697 171 aa11.12□□□□□ -0.63
SNRPB-201ENST00000381342 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SNRPB-201ENST00000381342 LYPD5Q6UWN5 251 aa11.12□□□□□ -0.63
SNRPB-201ENST00000381342 EPPK1P58107 5090 aaKnown RBP11.12□□□□□ -0.63
SNRPB-201ENST00000381342 A0A087WWC5 75 aa11.11□□□□□ -0.63
SNRPB-201ENST00000381342 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
SNRPB-201ENST00000381342 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
SNRPB-201ENST00000381342 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
SNRPB-201ENST00000381342 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
SNRPB-201ENST00000381342 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
SNRPB-201ENST00000381342 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
SNRPB-201ENST00000381342 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
SNRPB-201ENST00000381342 UPK3BQ9BT76 320 aa11.1□□□□□ -0.63
SNRPB-201ENST00000381342 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 SMIM27A0A1W2PRY6 76 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 PPP1R2P9O14990 202 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms