RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 FAM240AA0A1B0GVK7 77 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 NDUFB1O75438 58 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 MDFICQ9P1T7 246 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 TIRAPP58753 221 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 LINC00643Q86TS7 51 aa13.15□□□□□ -0.3
SNAPC3-202ENST00000380821 TMEM89A2RUT3 159 aa13.15□□□□□ -0.31
SNAPC3-202ENST00000380821 Q6ZUT4 128 aa13.15□□□□□ -0.31
SNAPC3-202ENST00000380821 PIP4P1Q86T03 277 aa13.15□□□□□ -0.31
SNAPC3-202ENST00000380821 NFE4Q86UQ8 179 aa13.15□□□□□ -0.31
SNAPC3-202ENST00000380821 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.31
SNAPC3-202ENST00000380821 CGB7P0DN87 165 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 MIAQ16674 131 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 NDUFA1O15239 70 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 MPLKIPQ8TAP9 179 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 TCL1BO95988 128 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 PDE6GP18545 87 aa13.14□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV4-28A0A0C4DH34 117 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 MYO7BQ6PIF6 2116 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 P0C879 139 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 HEATR5AQ86XA9 2040 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 ANAPC1Q9H1A4 1944 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 C20orf203Q8NBC4 194 aa13.13□□□□□ -0.31
SNAPC3-202ENST00000380821 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 GPHB5Q86YW7 130 aa13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 ZMAT4Q9H898 229 aa13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 DIRC1Q969H9 104 aa13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 AHCTF1Q8WYP5 2266 aa13.12□□□□□ -0.31
SNAPC3-202ENST00000380821 IGLV10-54A0A075B6I4 117 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 A0A087WW49 117 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 RETNQ9HD89 108 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 CLPSL1A2RUU4 121 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 IGLV1-47P01700 117 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 IGLV2-8P01709 118 aa13.11□□□□□ -0.31
SNAPC3-202ENST00000380821 TPRP12270 2363 aaKnown RBP13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 WFDC11Q8NEX6 87 aa13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 Q9HAA7 133 aa13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 PLXNB3Q9ULL4 1909 aa13.1□□□□□ -0.31
SNAPC3-202ENST00000380821 UQCRQO14949 82 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 E7EUB6 86 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 HHLA3Q9XRX5 114 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGKV1D-37A0A075B6S9 117 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV3-30P01768 117 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV3-33P01772 117 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV3-30-5P0DP03 117 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 HIGD2BQ4VC39 106 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 IGHV4-61A0A0C4DH41 118 aa13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 GRNP28799 593 aaKnown RBP13.09□□□□□ -0.31
SNAPC3-202ENST00000380821 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
SNAPC3-202ENST00000380821 BLCAPP62952 87 aa13.08□□□□□ -0.32
SNAPC3-202ENST00000380821 HEATR1Q9H583 2144 aaKnown RBP13.08□□□□□ -0.32
SNAPC3-202ENST00000380821 MED12Q93074 2177 aa13.07□□□□□ -0.32
SNAPC3-202ENST00000380821 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
SNAPC3-202ENST00000380821 Q8N7P7 452 aa13.07□□□□□ -0.32
SNAPC3-202ENST00000380821 LOXL1Q08397 574 aaPredicted RBP13.07□□□□□ -0.32
SNAPC3-202ENST00000380821 FER1L5A0AVI2 2057 aa13.07□□□□□ -0.32
SNAPC3-202ENST00000380821 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
SNAPC3-202ENST00000380821 TRBV12-3P01733 135 aa13.06□□□□□ -0.32
SNAPC3-202ENST00000380821 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
SNAPC3-202ENST00000380821 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
SNAPC3-202ENST00000380821 TM2D2Q9BX73 214 aa13.06□□□□□ -0.32
SNAPC3-202ENST00000380821 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 FAM236DA0A1B0GTK5 79 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 FAM236CP0DP71 79 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 C14orf132Q9NPU4 83 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 PROP1O75360 226 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 IGLC6P0CF74 106 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 NEXN-AS1Q8NBZ9 246 aa13.05□□□□□ -0.32
SNAPC3-202ENST00000380821 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 C10orf105Q8TEF2 133 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 FAM186AA6NE01 2351 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 A0A0J9YX75 114 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 IGHV4-30-2A0A087WSY4 118 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
SNAPC3-202ENST00000380821 COX7BP24311 80 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 CCL18P55774 89 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 SIRPDQ9H106 197 aa13.03□□□□□ -0.32
SNAPC3-202ENST00000380821 WT1P19544 449 aaPredicted RBP13.02□□□□□ -0.32
SNAPC3-202ENST00000380821 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.33
SNAPC3-202ENST00000380821 ATP5EP2Q5VTU8 51 aa13.02□□□□□ -0.33
SNAPC3-202ENST00000380821 LINC00322Q6ZN03 302 aaPredicted RBP13.02□□□□□ -0.33
SNAPC3-202ENST00000380821 LINC00574Q9H8X3 128 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms