RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 GTSF1Q8WW33 167 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 SFRP2Q96HF1 295 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 FAM210BQ96KR6 192 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 CXCL1P09341 107 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 Q6ZSN1 163 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 C14orf178Q8N769 122 aaPredicted RBP8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
DEPDC4-202ENST00000378244 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 TCTAP57738 103 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 SLC25A29Q8N8R3 303 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 A8MWL6 223 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 NTF3P20783 257 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 C15orf53Q8NAA6 179 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 PTH2Q96A98 100 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 Q9UF83 564 aa8.17□□□□□ -1.1
DEPDC4-202ENST00000378244 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 CRYGDP07320 174 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 GYPEP15421 78 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 SLAQ13239 276 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 OR10G8Q8NGN5 311 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 V9GYV3 84 aa8.16□□□□□ -1.1
DEPDC4-202ENST00000378244 LCE6AA0A183 80 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 F2Z2F3 143 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 F8W036 122 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 TWIST1Q15672 202 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 UQCC3Q6UW78 93 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 HIGD1CA8MV81 97 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 F5H697 171 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 EVI2AP22794 236 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 PIK3CD-AS1Q5SR53 167 aa8.15□□□□□ -1.1
DEPDC4-202ENST00000378244 LINC00862A6NCI5 91 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 K7EQD1 137 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 NXPH4O95158 308 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 P0DMU3 169 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 FAM231AP0DMU4 169 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 FAM231CP0DMU5 169 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 ZNF56Q15929 161 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 TSKUQ8WUA8 353 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 DYNC2H1Q8NCM8 4307 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 SMIM17P0DL12 118 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 CTRLP40313 264 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 LGALS9CQ6DKI2 356 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 ICOSQ9Y6W8 199 aa8.14□□□□□ -1.11
DEPDC4-202ENST00000378244 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 H3BNG1 76 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 MGPP08493 103 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 SRIP30626 198 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 CT83Q5H943 113 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 TRBV6-4A0A1B0GX49 114 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 RHODO00212 210 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 CCL18P55774 89 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 CACNG7P62955 275 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 MRPL23Q16540 153 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 ESRGQ1W209 222 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
DEPDC4-202ENST00000378244 GAGE12JA6NER3 117 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 GAGE1Q13065 139 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 GAGE4Q13068 117 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 GAGE5Q13069 117 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 RHOHQ15669 191 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 RNF212Q495C1 297 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 NEGR1Q7Z3B1 354 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 NUP35Q8NFH5 326 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
DEPDC4-202ENST00000378244 RYR3Q15413 4870 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 HYDINQ4G0P3 5121 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 BORCS7Q96B45 105 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 KIF25-AS1Q9Y6Z4 181 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 CNFNQ9BYD5 112 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 GFRA4Q9GZZ7 299 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 NAT8BQ9UHF3 227 aa8.11□□□□□ -1.11
DEPDC4-202ENST00000378244 A0A1B0GUT8 65 aa8.1□□□□□ -1.11
DEPDC4-202ENST00000378244 LINC00315P59091 139 aa8.1□□□□□ -1.11
DEPDC4-202ENST00000378244 SEC11CQ9BY50 192 aa8.1□□□□□ -1.11
DEPDC4-202ENST00000378244 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
DEPDC4-202ENST00000378244 M0R2N4 97 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 FAM3BP58499 235 aaPredicted RBP8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 ZNRF2Q8NHG8 242 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 FAM231BA6NCW3 169 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 MT-ND4LP03901 98 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 CAMPP49913 170 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms