RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 NXPH4O95158 308 aa17.28■□□□□ 0.36
FOXA2-201ENST00000377115 ZNF688P0C7X2 276 aa17.28■□□□□ 0.36
FOXA2-201ENST00000377115 IGHV4OR15-8A0A075B7B6 117 aa17.27■□□□□ 0.36
FOXA2-201ENST00000377115 A0A087WW49 117 aa17.27■□□□□ 0.36
FOXA2-201ENST00000377115 RAX2Q96IS3 184 aa17.27■□□□□ 0.36
FOXA2-201ENST00000377115 APRG1Q8IVJ8 170 aa17.27■□□□□ 0.35
FOXA2-201ENST00000377115 CEP295Q9C0D2 2601 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 FAM223BA6NKX1 122 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 J3QQQ9 107 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 FAM223AQ8IWN6 122 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 F5H697 171 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 EIF4EBP3O60516 100 aaPredicted RBP17.26■□□□□ 0.35
FOXA2-201ENST00000377115 ZNF876PQ49A33 203 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 C19orf54Q5BKX5 351 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 TMEM141Q96I45 108 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 TIMM17AQ99595 171 aa17.26■□□□□ 0.35
FOXA2-201ENST00000377115 SDHAF1A6NFY7 115 aa17.25■□□□□ 0.35
FOXA2-201ENST00000377115 NPFFO15130 113 aa17.25■□□□□ 0.35
FOXA2-201ENST00000377115 CRIP2P52943 208 aaPredicted RBP17.25■□□□□ 0.35
FOXA2-201ENST00000377115 RPL32P62910 135 aaKnown RBP17.25■□□□□ 0.35
FOXA2-201ENST00000377115 RNF183Q96D59 192 aa17.25■□□□□ 0.35
FOXA2-201ENST00000377115 IGHV3OR16-10A0A075B7F0 116 aa17.24■□□□□ 0.35
FOXA2-201ENST00000377115 A0A1W2PPR1 153 aa17.24■□□□□ 0.35
FOXA2-201ENST00000377115 VCYO14598 125 aa17.24■□□□□ 0.35
FOXA2-201ENST00000377115 IGHV3-11P01762 117 aa17.24■□□□□ 0.35
FOXA2-201ENST00000377115 ADORA2A-AS1P86434 159 aa17.24■□□□□ 0.35
FOXA2-201ENST00000377115 OPRPNQ99935 248 aaPredicted RBP17.24■□□□□ 0.35
FOXA2-201ENST00000377115 A4D1N5 150 aa17.23■□□□□ 0.35
FOXA2-201ENST00000377115 NDUFA4O00483 81 aa17.23■□□□□ 0.35
FOXA2-201ENST00000377115 LGALS3P17931 250 aaKnown RBP17.23■□□□□ 0.35
FOXA2-201ENST00000377115 GATA3P23771 443 aa17.23■□□□□ 0.35
FOXA2-201ENST00000377115 TRPT1Q86TN4 253 aaKnown RBP17.23■□□□□ 0.35
FOXA2-201ENST00000377115 PTPRQQ9UMZ3 2332 aa17.23■□□□□ 0.35
FOXA2-201ENST00000377115 SRD5A1P18405 259 aa17.23■□□□□ 0.35
FOXA2-201ENST00000377115 SLC25A20O43772 301 aa17.22■□□□□ 0.35
FOXA2-201ENST00000377115 ERG28Q9UKR5 140 aa17.22■□□□□ 0.35
FOXA2-201ENST00000377115 C9JAW5 83 aa17.22■□□□□ 0.35
FOXA2-201ENST00000377115 H7C2G1 150 aa17.22■□□□□ 0.35
FOXA2-201ENST00000377115 VCX2Q9H322 139 aa17.22■□□□□ 0.35
FOXA2-201ENST00000377115 ZNF256Q9Y2P7 627 aaPredicted RBP17.22■□□□□ 0.35
FOXA2-201ENST00000377115 FAM74A4Q5TZK3 123 aa17.21■□□□□ 0.35
FOXA2-201ENST00000377115 MOB4Q9Y3A3 225 aa17.21■□□□□ 0.35
FOXA2-201ENST00000377115 FAM159AQ6UWV7 190 aa17.21■□□□□ 0.35
FOXA2-201ENST00000377115 IGHV3-64A0A075B6Q5 118 aa17.2■□□□□ 0.34
FOXA2-201ENST00000377115 AKAP6Q13023 2319 aa17.2■□□□□ 0.34
FOXA2-201ENST00000377115 PTPRZ1P23471 2315 aaPredicted RBP17.2■□□□□ 0.34
FOXA2-201ENST00000377115 IGHV3-33P01772 117 aa17.19■□□□□ 0.34
FOXA2-201ENST00000377115 SVIPQ8NHG7 77 aa17.19■□□□□ 0.34
FOXA2-201ENST00000377115 TRAV2A0A0B4J234 112 aa17.19■□□□□ 0.34
FOXA2-201ENST00000377115 TRBV27A0A0K0K1C4 114 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 KLLNB2CW77 178 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 EDN2P20800 178 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 TMEM263Q8WUH6 116 aaKnown RBP17.18■□□□□ 0.34
FOXA2-201ENST00000377115 RHPN1-AS1Q9BWJ2 59 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 VPS13CQ709C8 3753 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 K7ENP7 123 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 BPESC1Q9GZL8 116 aa17.18■□□□□ 0.34
FOXA2-201ENST00000377115 TRAV12-3A0A0B4J271 114 aa17.17■□□□□ 0.34
FOXA2-201ENST00000377115 ELANEP08246 267 aa17.17■□□□□ 0.34
FOXA2-201ENST00000377115 ANAPC13Q9BS18 74 aa17.17■□□□□ 0.34
FOXA2-201ENST00000377115 LMO4P61968 165 aa17.17■□□□□ 0.34
FOXA2-201ENST00000377115 TRBV7-9A0A0J9YWB2 115 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 TMEM223A0PJW6 202 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 ZFAND6Q6FIF0 208 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 MUSTN1Q8IVN3 82 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 TMEM262E9PQX1 116 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 ZNF580Q9UK33 172 aa17.16■□□□□ 0.34
FOXA2-201ENST00000377115 LGALS9O00182 355 aa17.15■□□□□ 0.34
FOXA2-201ENST00000377115 LEPROTO15243 131 aa17.15■□□□□ 0.34
FOXA2-201ENST00000377115 BRD3OSQ6XYD6 125 aa17.14■□□□□ 0.33
FOXA2-201ENST00000377115 TEX29Q8N6K0 151 aa17.14■□□□□ 0.33
FOXA2-201ENST00000377115 CITED1Q99966 193 aa17.14■□□□□ 0.33
FOXA2-201ENST00000377115 TRBV6-5A0A0K0K1A5 114 aa17.13■□□□□ 0.33
FOXA2-201ENST00000377115 ZNF56Q15929 161 aa17.13■□□□□ 0.33
FOXA2-201ENST00000377115 TCF15Q12870 199 aa17.13■□□□□ 0.33
FOXA2-201ENST00000377115 UBTD1Q9HAC8 227 aa17.13■□□□□ 0.33
FOXA2-201ENST00000377115 A0A0B4J2C4 111 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 ZNF22P17026 224 aaPredicted RBP17.12■□□□□ 0.33
FOXA2-201ENST00000377115 P0DMU3 169 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 FAM231AP0DMU4 169 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 FAM231CP0DMU5 169 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 Q1RN00 199 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 NTN5Q8WTR8 489 aaPredicted RBP17.12■□□□□ 0.33
FOXA2-201ENST00000377115 MDFICQ9P1T7 246 aa17.12■□□□□ 0.33
FOXA2-201ENST00000377115 ATRXP46100 2492 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 M0QY20 66 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 RHODO00212 210 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 IGHV1-69P01742 117 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 PF4V1P10720 104 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 LY6EQ16553 131 aa17.11■□□□□ 0.33
FOXA2-201ENST00000377115 NSUN5P1Q3KNT7 163 aa17.1■□□□□ 0.33
FOXA2-201ENST00000377115 A0A0J9YXV3 536 aa17.1■□□□□ 0.33
FOXA2-201ENST00000377115 IGHV4-39P01824 125 aa17.1■□□□□ 0.33
FOXA2-201ENST00000377115 FOXC1Q12948 553 aa17.1■□□□□ 0.33
FOXA2-201ENST00000377115 BEX4Q9NWD9 120 aaPredicted RBP17.1■□□□□ 0.33
FOXA2-201ENST00000377115 SPTAN1Q13813 2472 aaKnown RBP17.1■□□□□ 0.33
FOXA2-201ENST00000377115 TRAV12-2A0A075B6T6 113 aa17.09■□□□□ 0.33
FOXA2-201ENST00000377115 M0QXV9 152 aa17.09■□□□□ 0.33
FOXA2-201ENST00000377115 Q8N1Y9 231 aa17.09■□□□□ 0.33
FOXA2-201ENST00000377115 COL6A6A6NMZ7 2263 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms