RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 C20orf144Q9BQM9 153 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 DENND4AQ7Z401 1863 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 DYSFO75923 2080 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 PROP1O75360 226 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 COL4A4P53420 1690 aaPredicted RBP10.47□□□□□ -0.73
GPC6-201ENST00000377047 K7ERJ3 54 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
GPC6-201ENST00000377047 TRBV7-3A0A075B6L6 115 aa10.46□□□□□ -0.73
GPC6-201ENST00000377047 C9orf118A6NHY6 69 aa10.46□□□□□ -0.73
GPC6-201ENST00000377047 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.73
GPC6-201ENST00000377047 TM2D2Q9BX73 214 aa10.46□□□□□ -0.73
GPC6-201ENST00000377047 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
GPC6-201ENST00000377047 IGLC2P0DOY2 106 aa10.46□□□□□ -0.74
GPC6-201ENST00000377047 IGLC3P0DOY3 106 aa10.46□□□□□ -0.74
GPC6-201ENST00000377047 C10orf91Q5T1B1 145 aa10.45□□□□□ -0.74
GPC6-201ENST00000377047 PTPRQQ9UMZ3 2332 aa10.45□□□□□ -0.74
GPC6-201ENST00000377047 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
GPC6-201ENST00000377047 Q6YL49 198 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 OBSL1O75147 1896 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 UTF1Q5T230 341 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 IGLV2-14P01704 120 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
GPC6-201ENST00000377047 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 UBE2AP49459 152 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 FAM167A-AS1Q96KT0 104 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 NDUFA1O15239 70 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
GPC6-201ENST00000377047 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
GPC6-201ENST00000377047 A0A0J9YXV3 536 aa10.42□□□□□ -0.74
GPC6-201ENST00000377047 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
GPC6-201ENST00000377047 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
GPC6-201ENST00000377047 FANCD2OSQ96PS1 177 aa10.42□□□□□ -0.74
GPC6-201ENST00000377047 ORMDL1Q9P0S3 153 aa10.42□□□□□ -0.74
GPC6-201ENST00000377047 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
GPC6-201ENST00000377047 A0A0J9YX75 114 aa10.41□□□□□ -0.74
GPC6-201ENST00000377047 NCR3O14931 201 aa10.41□□□□□ -0.74
GPC6-201ENST00000377047 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
GPC6-201ENST00000377047 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
GPC6-201ENST00000377047 PPDPFLQ8WWR9 84 aa10.41□□□□□ -0.74
GPC6-201ENST00000377047 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.74
GPC6-201ENST00000377047 SHANK1Q9Y566 2161 aa10.4□□□□□ -0.74
GPC6-201ENST00000377047 LYPD6Q86Y78 171 aa10.4□□□□□ -0.74
GPC6-201ENST00000377047 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
GPC6-201ENST00000377047 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
GPC6-201ENST00000377047 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 ZNF106Q9H2Y7 1883 aaKnown RBP10.39□□□□□ -0.75
GPC6-201ENST00000377047 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 CFC1P0CG37 223 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 KIAA1549LQ6ZVL6 1849 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 BDP1A6H8Y1 2624 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 SIVA1O15304 175 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 LY6G6DO95868 133 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 A0A1W2PPM0 123 aa10.39□□□□□ -0.75
GPC6-201ENST00000377047 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 F8W1H4 67 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 H3BMG7 143 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 K7EP34 96 aa10.38□□□□□ -0.75
GPC6-201ENST00000377047 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 TRAV26-1A0A087WT03 109 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 DAND5Q8N907 189 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 RNF183Q96D59 192 aa10.37□□□□□ -0.75
GPC6-201ENST00000377047 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
GPC6-201ENST00000377047 FUSP35637 526 aaKnown RBP eCLIP10.36□□□□□ -0.75
GPC6-201ENST00000377047 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
GPC6-201ENST00000377047 CCL25O15444 150 aa10.36□□□□□ -0.75
GPC6-201ENST00000377047 ZNF124Q15973 351 aa10.36□□□□□ -0.75
GPC6-201ENST00000377047 MUSTN1Q8IVN3 82 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 RS1O15537 224 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 TRACP01848 142 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 HILS1P60008 231 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 BAALCQ8WXS3 180 aa10.35□□□□□ -0.75
GPC6-201ENST00000377047 LINC00173Q6ZV60 143 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 IFITM1P13164 125 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 Q6ZSV7 163 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 TP53TG3Q9ULZ0 132 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 TOMM6Q96B49 74 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 IGF1P05019 195 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms