RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SAP30O75446 220 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 FCER1GP30273 86 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 LINC00315P59091 139 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 SMIM2Q9BVW6 85 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 JPT2Q9H910 190 aa12.36□□□□□ -0.43
HLA-A-202ENST00000376806 CBY3A6NI87 242 aa12.35□□□□□ -0.43
HLA-A-202ENST00000376806 KRTAP10-3P60369 221 aa12.35□□□□□ -0.43
HLA-A-202ENST00000376806 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
HLA-A-202ENST00000376806 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
HLA-A-202ENST00000376806 CTAG1AP78358 180 aa12.34□□□□□ -0.43
HLA-A-202ENST00000376806 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
HLA-A-202ENST00000376806 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
HLA-A-202ENST00000376806 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
HLA-A-202ENST00000376806 OR11H12B2RN74 326 aa12.34□□□□□ -0.43
HLA-A-202ENST00000376806 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
HLA-A-202ENST00000376806 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
HLA-A-202ENST00000376806 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
HLA-A-202ENST00000376806 A0A087WWL8 130 aa12.33□□□□□ -0.44
HLA-A-202ENST00000376806 LAGE3Q14657 143 aa12.33□□□□□ -0.44
HLA-A-202ENST00000376806 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
HLA-A-202ENST00000376806 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
HLA-A-202ENST00000376806 PPP1R17O96001 155 aa12.32□□□□□ -0.44
HLA-A-202ENST00000376806 INSP01308 110 aa12.32□□□□□ -0.44
HLA-A-202ENST00000376806 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
HLA-A-202ENST00000376806 TCAPO15273 167 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 STHQ8IWL8 128 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 PMCHL2Q9BQD1 86 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 IGLL1P15814 213 aa12.31□□□□□ -0.44
HLA-A-202ENST00000376806 HTN1P15515 57 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 LGALS9BQ3B8N2 356 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 TRPT1Q86TN4 253 aaKnown RBP12.3□□□□□ -0.44
HLA-A-202ENST00000376806 C18orf15Q96N68 181 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
HLA-A-202ENST00000376806 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
HLA-A-202ENST00000376806 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
HLA-A-202ENST00000376806 UQCR10Q9UDW1 63 aa12.29□□□□□ -0.44
HLA-A-202ENST00000376806 CRYGDP07320 174 aa12.29□□□□□ -0.44
HLA-A-202ENST00000376806 ZNF415Q09FC8 603 aa12.29□□□□□ -0.44
HLA-A-202ENST00000376806 F5H697 171 aa12.28□□□□□ -0.44
HLA-A-202ENST00000376806 CMC4P56277 68 aaPredicted RBP12.28□□□□□ -0.44
HLA-A-202ENST00000376806 ZNF56Q15929 161 aa12.28□□□□□ -0.44
HLA-A-202ENST00000376806 ORMDL2Q53FV1 153 aa12.28□□□□□ -0.44
HLA-A-202ENST00000376806 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
HLA-A-202ENST00000376806 ATRQ13535 2644 aa12.28□□□□□ -0.44
HLA-A-202ENST00000376806 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.44
HLA-A-202ENST00000376806 K7EMI3 77 aa12.27□□□□□ -0.44
HLA-A-202ENST00000376806 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.44
HLA-A-202ENST00000376806 PRIMA1Q86XR5 153 aa12.27□□□□□ -0.44
HLA-A-202ENST00000376806 LINC01587Q99440 93 aa12.27□□□□□ -0.44
HLA-A-202ENST00000376806 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.44
HLA-A-202ENST00000376806 NUDT3O95989 172 aa12.27□□□□□ -0.45
HLA-A-202ENST00000376806 PF4P02776 101 aa12.27□□□□□ -0.45
HLA-A-202ENST00000376806 PRM2P04554 102 aa12.27□□□□□ -0.45
HLA-A-202ENST00000376806 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
HLA-A-202ENST00000376806 XCL2Q9UBD3 114 aa12.27□□□□□ -0.45
HLA-A-202ENST00000376806 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
HLA-A-202ENST00000376806 EREGO14944 169 aa12.26□□□□□ -0.45
HLA-A-202ENST00000376806 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
HLA-A-202ENST00000376806 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
HLA-A-202ENST00000376806 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
HLA-A-202ENST00000376806 ATP5LO75964 103 aa12.25□□□□□ -0.45
HLA-A-202ENST00000376806 C11orf72Q8NBR9 251 aa12.25□□□□□ -0.45
HLA-A-202ENST00000376806 M0R2P5 195 aa12.25□□□□□ -0.45
HLA-A-202ENST00000376806 Q6ZN92 141 aa12.25□□□□□ -0.45
HLA-A-202ENST00000376806 FBN1P35555 2871 aaKnown RBP12.25□□□□□ -0.45
HLA-A-202ENST00000376806 TRBV6-5A0A0K0K1A5 114 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 M0QY20 66 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 NEGR1Q7Z3B1 354 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 LURAP1LQ8IV03 231 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 PTH2Q96A98 100 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 C19orf73Q9NVV2 129 aa12.24□□□□□ -0.45
HLA-A-202ENST00000376806 POLR2KP53803 58 aaKnown RBP12.23□□□□□ -0.45
HLA-A-202ENST00000376806 NUTF2P61970 127 aaKnown RBP12.23□□□□□ -0.45
HLA-A-202ENST00000376806 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
HLA-A-202ENST00000376806 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
HLA-A-202ENST00000376806 SNHG12Q9BXW3 62 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
HLA-A-202ENST00000376806 ODF1Q14990 250 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 C1orf158Q8N1D5 194 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 TMEM208Q9BTX3 173 aa12.23□□□□□ -0.45
HLA-A-202ENST00000376806 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
HLA-A-202ENST00000376806 M0R143 59 aa12.22□□□□□ -0.45
HLA-A-202ENST00000376806 PRSS1P07477 247 aa12.22□□□□□ -0.45
HLA-A-202ENST00000376806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
HLA-A-202ENST00000376806 SPXQ9BT56 116 aa12.22□□□□□ -0.45
HLA-A-202ENST00000376806 DKK2Q9UBU2 259 aa12.22□□□□□ -0.45
HLA-A-202ENST00000376806 A8MWV9 139 aa12.21□□□□□ -0.45
HLA-A-202ENST00000376806 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
HLA-A-202ENST00000376806 VCYO14598 125 aa12.21□□□□□ -0.46
HLA-A-202ENST00000376806 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.46
HLA-A-202ENST00000376806 EDA2RQ9HAV5 297 aa12.21□□□□□ -0.46
HLA-A-202ENST00000376806 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms