RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ESM1Q9NQ30 184 aa15□□□□□ -0.01
VSX1-202ENST00000376709 HECTD1Q9ULT8 2610 aa14.99□□□□□ -0.01
VSX1-202ENST00000376709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.99□□□□□ -0.01
VSX1-202ENST00000376709 LINC00315P59091 139 aa14.99□□□□□ -0.01
VSX1-202ENST00000376709 DEFB131AP59861 70 aa14.99□□□□□ -0.01
VSX1-202ENST00000376709 ZNF124Q15973 351 aa14.99□□□□□ -0.01
VSX1-202ENST00000376709 C9orf85Q96MD7 179 aa14.99□□□□□ -0.01
VSX1-202ENST00000376709 FASNP49327 2511 aaKnown RBP14.99□□□□□ -0.01
VSX1-202ENST00000376709 F5H697 171 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 DPM2O94777 84 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 AMTNQ6UX39 209 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 SYT8Q8NBV8 401 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 DLX4Q92988 240 aaPredicted RBP14.98□□□□□ -0.01
VSX1-202ENST00000376709 KNCNA6PVL3 124 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 BOD1L2Q8IYS8 172 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 TMEM61Q8N0U2 210 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 DYNLRB2Q8TF09 96 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 CSTL1Q9H114 145 aa14.98□□□□□ -0.01
VSX1-202ENST00000376709 FAM74A4Q5TZK3 123 aa14.97□□□□□ -0.01
VSX1-202ENST00000376709 SUMO4Q6EEV6 95 aa14.97□□□□□ -0.01
VSX1-202ENST00000376709 HHLA3Q9XRX5 114 aa14.97□□□□□ -0.01
VSX1-202ENST00000376709 PCP2Q8IVA1 136 aa14.96□□□□□ -0.01
VSX1-202ENST00000376709 TOMM6Q96B49 74 aa14.96□□□□□ -0.01
VSX1-202ENST00000376709 SCGB3A1Q96QR1 104 aa14.96□□□□□ -0.01
VSX1-202ENST00000376709 ERASQ7Z444 233 aa14.95□□□□□ -0.02
VSX1-202ENST00000376709 TMEM160Q9NX00 188 aa14.95□□□□□ -0.02
VSX1-202ENST00000376709 MRPL35Q9NZE8 188 aaKnown RBP14.95□□□□□ -0.02
VSX1-202ENST00000376709 A0A087WX48 190 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 TRAV2A0A0B4J234 112 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 TAX1BP3O14907 124 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 HLA-DRB4P13762 266 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 HLA-DRB4X5D2U9 266 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 CBY3A6NI87 242 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 ZC2HC1BQ5TFG8 222 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 C2orf66Q6UXQ4 117 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 NEGR1Q7Z3B1 354 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 C11orf44Q8N8P7 122 aa14.94□□□□□ -0.02
VSX1-202ENST00000376709 TRGV11A0A075B6L2 103 aa14.93□□□□□ -0.02
VSX1-202ENST00000376709 IGKV2D-26A0A0A0MRZ7 120 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 H3BMM0 161 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 HTN1P15515 57 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 ZNF56Q15929 161 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 MTORP42345 2549 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 TMEM97Q5BJF2 176 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 GTSCR1Q86UQ5 136 aa14.92□□□□□ -0.02
VSX1-202ENST00000376709 A0A1W2PRX2 142 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 CCL25O15444 150 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 PLNP26678 52 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 ZNF876PQ49A33 203 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 RBMY1A1P0DJD3 496 aaKnown RBP14.91□□□□□ -0.02
VSX1-202ENST00000376709 RBMY1CP0DJD4 496 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 RPL32P62910 135 aaKnown RBP14.91□□□□□ -0.02
VSX1-202ENST00000376709 RBMY1FQ15415 496 aaKnown RBP14.91□□□□□ -0.02
VSX1-202ENST00000376709 DEFB114Q30KQ6 69 aa14.91□□□□□ -0.02
VSX1-202ENST00000376709 TRAV12-1A0A0B4J245 112 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 SIVA1O15304 175 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 PTTG1IPP53801 180 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 CD300EQ496F6 205 aaPredicted RBP14.9□□□□□ -0.02
VSX1-202ENST00000376709 RAX2Q96IS3 184 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 KIR2DL4Q99706 377 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 MAP6D1Q9H9H5 199 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 H7C1H1 209 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 POLR2KP53803 58 aaKnown RBP14.9□□□□□ -0.02
VSX1-202ENST00000376709 TTTY13Q9BZ97 58 aa14.9□□□□□ -0.02
VSX1-202ENST00000376709 SDHAF1A6NFY7 115 aa14.89□□□□□ -0.03
VSX1-202ENST00000376709 F8VRH5 84 aa14.89□□□□□ -0.03
VSX1-202ENST00000376709 VCYO14598 125 aa14.89□□□□□ -0.03
VSX1-202ENST00000376709 CRYGDP07320 174 aa14.89□□□□□ -0.03
VSX1-202ENST00000376709 A8MTW9 85 aa14.88□□□□□ -0.03
VSX1-202ENST00000376709 UBE2V1Q13404 147 aa14.88□□□□□ -0.03
VSX1-202ENST00000376709 DEFB104AQ8WTQ1 72 aa14.88□□□□□ -0.03
VSX1-202ENST00000376709 CYSLTR1Q9Y271 337 aa14.88□□□□□ -0.03
VSX1-202ENST00000376709 RBMY1BA6NDE4 496 aaKnown RBP14.88□□□□□ -0.03
VSX1-202ENST00000376709 RBMY1EA6NEQ0 496 aaKnown RBP14.88□□□□□ -0.03
VSX1-202ENST00000376709 RBMY1DP0C7P1 496 aaKnown RBP14.88□□□□□ -0.03
VSX1-202ENST00000376709 NEXN-AS1Q8NBZ9 246 aa14.88□□□□□ -0.03
VSX1-202ENST00000376709 CHTOPQ9Y3Y2 248 aaKnown RBP14.88□□□□□ -0.03
VSX1-202ENST00000376709 CD28P10747 220 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 SPAG8Q99932 426 aaPredicted RBP14.87□□□□□ -0.03
VSX1-202ENST00000376709 SMR3AQ99954 134 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 WNK1Q9H4A3 2382 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 VAMP3Q15836 100 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 ZFP2Q6ZN57 461 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 BAALCQ8WXS3 180 aa14.87□□□□□ -0.03
VSX1-202ENST00000376709 M0QY20 66 aa14.86□□□□□ -0.03
VSX1-202ENST00000376709 SEC11AP67812 179 aa14.86□□□□□ -0.03
VSX1-202ENST00000376709 HSD52Q0P140 79 aa14.86□□□□□ -0.03
VSX1-202ENST00000376709 TP53TG1Q9Y2A0 90 aa14.86□□□□□ -0.03
VSX1-202ENST00000376709 SETD2Q9BYW2 2564 aaPredicted RBP14.86□□□□□ -0.03
VSX1-202ENST00000376709 TRBV6-5A0A0K0K1A5 114 aa14.85□□□□□ -0.03
VSX1-202ENST00000376709 CCL24O00175 119 aa14.85□□□□□ -0.03
VSX1-202ENST00000376709 TRBV27A0A0K0K1C4 114 aa14.85□□□□□ -0.03
VSX1-202ENST00000376709 ZNF256Q9Y2P7 627 aaPredicted RBP14.85□□□□□ -0.03
VSX1-202ENST00000376709 OTOGQ6ZRI0 2925 aa14.84□□□□□ -0.03
VSX1-202ENST00000376709 RNASE1P07998 156 aaKnown RBP14.84□□□□□ -0.03
VSX1-202ENST00000376709 FHL3Q13643 280 aa14.84□□□□□ -0.03
VSX1-202ENST00000376709 TRPT1Q86TN4 253 aaKnown RBP14.84□□□□□ -0.03
VSX1-202ENST00000376709 LINC01549A6NIU2 74 aa14.84□□□□□ -0.03
VSX1-202ENST00000376709 CITED2Q99967 270 aaPredicted RBP14.84□□□□□ -0.03
VSX1-202ENST00000376709 SCGB2A2Q13296 93 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms