RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 J3QQQ9 107 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 UBE2E1P51965 193 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 A0A087WW49 117 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 A0A087WWL8 130 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 SLC25A20O43772 301 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 RPL11P62913 178 aaKnown RBP12.39□□□□□ -0.43
TRIM39-201ENST00000376656 A4D1N5 150 aa12.38□□□□□ -0.43
TRIM39-201ENST00000376656 C9JAW5 83 aa12.38□□□□□ -0.43
TRIM39-201ENST00000376656 C5orf56Q8N8D9 126 aa12.38□□□□□ -0.43
TRIM39-201ENST00000376656 ANAPC13Q9BS18 74 aa12.38□□□□□ -0.43
TRIM39-201ENST00000376656 TMEM141Q96I45 108 aa12.38□□□□□ -0.43
TRIM39-201ENST00000376656 H7C2G1 150 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 NXPH4O95158 308 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 LGALS3P17931 250 aaKnown RBP12.37□□□□□ -0.43
TRIM39-201ENST00000376656 TIMM17AQ99595 171 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 NBASA2RRP1 2371 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 F5H697 171 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
TRIM39-201ENST00000376656 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
TRIM39-201ENST00000376656 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
TRIM39-201ENST00000376656 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 SDHAF1A6NFY7 115 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 VCYO14598 125 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 FBXL19-AS1Q494R0 122 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
TRIM39-201ENST00000376656 CCL21O00585 134 aa12.35□□□□□ -0.43
TRIM39-201ENST00000376656 IGHV3-64A0A075B6Q5 118 aa12.35□□□□□ -0.43
TRIM39-201ENST00000376656 TMEM262E9PQX1 116 aa12.35□□□□□ -0.43
TRIM39-201ENST00000376656 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
TRIM39-201ENST00000376656 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
TRIM39-201ENST00000376656 CITED1Q99966 193 aa12.35□□□□□ -0.43
TRIM39-201ENST00000376656 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-201ENST00000376656 ZFHX2Q9C0A1 2572 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-201ENST00000376656 ELANEP08246 267 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 SPTA1P02549 2419 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 SS18L2Q9UHA2 77 aa12.34□□□□□ -0.43
TRIM39-201ENST00000376656 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
TRIM39-201ENST00000376656 SRD5A1P18405 259 aa12.33□□□□□ -0.44
TRIM39-201ENST00000376656 MUSTN1Q8IVN3 82 aa12.33□□□□□ -0.44
TRIM39-201ENST00000376656 NDUFA4O00483 81 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 NPFFO15130 113 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
TRIM39-201ENST00000376656 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
TRIM39-201ENST00000376656 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-201ENST00000376656 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-201ENST00000376656 LEPROTO15243 131 aa12.31□□□□□ -0.44
TRIM39-201ENST00000376656 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
TRIM39-201ENST00000376656 CRLF1O75462 422 aa12.31□□□□□ -0.44
TRIM39-201ENST00000376656 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
TRIM39-201ENST00000376656 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
TRIM39-201ENST00000376656 KLLNB2CW77 178 aa12.3□□□□□ -0.44
TRIM39-201ENST00000376656 Q8N1Y9 231 aa12.3□□□□□ -0.44
TRIM39-201ENST00000376656 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 A0A1W2PPR1 153 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 M0QXV9 152 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 TCF15Q12870 199 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 GAGE5Q13069 117 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 GAGE6Q13070 117 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 Q1RN00 199 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 LGALS9O00182 355 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 IGHV4-39P01824 125 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 MOB4Q9Y3A3 225 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 PTPRZ1P23471 2315 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-201ENST00000376656 TRBV7-9A0A0J9YWB2 115 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 P0DMU3 169 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-201ENST00000376656 EDN2P20800 178 aa12.29□□□□□ -0.44
TRIM39-201ENST00000376656 BEX4Q9NWD9 120 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-201ENST00000376656 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 B5MCH6 92 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 RHODO00212 210 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 ADORA2A-AS1P86434 159 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
TRIM39-201ENST00000376656 A0A0J9YXV3 536 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 SNCGO76070 127 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 GAGE2BQ13066 116 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 ZNF56Q15929 161 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 TEX49A0A1B0GTD5 131 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 IGHV1-69P01742 117 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 ATXN8Q156A1 80 aa12.27□□□□□ -0.45
TRIM39-201ENST00000376656 PTPRQQ9UMZ3 2332 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms