RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 TINCRA0A1B0GVN0 87 aa16.27■□□□□ 0.19
TGFBR1-202ENST00000374994 ATOX1O00244 68 aa16.27■□□□□ 0.19
TGFBR1-202ENST00000374994 C20orf203Q8NBC4 194 aa16.27■□□□□ 0.19
TGFBR1-202ENST00000374994 NDUFA11Q86Y39 141 aa16.26■□□□□ 0.19
TGFBR1-202ENST00000374994 IGHV4-59P01825 116 aa16.26■□□□□ 0.19
TGFBR1-202ENST00000374994 NBL1P41271 181 aa16.26■□□□□ 0.19
TGFBR1-202ENST00000374994 SS18L2Q9UHA2 77 aa16.26■□□□□ 0.19
TGFBR1-202ENST00000374994 Q8N1Y9 231 aa16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 MYCNOSP40205 109 aa16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 SND1-IT1Q9HBX3 110 aa16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 A0A1W2PNU3 283 aaPredicted RBP16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 K7EQD1 137 aa16.25■□□□□ 0.19
TGFBR1-202ENST00000374994 PCNX1Q96RV3 2341 aa16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 FSTL3O95633 263 aa16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 NOTCH3Q9UM47 2321 aa16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 FBXL19-AS1Q494R0 122 aa16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 NCOA6Q14686 2063 aaPredicted RBP16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 NOP10Q9NPE3 64 aaKnown RBP16.24■□□□□ 0.19
TGFBR1-202ENST00000374994 CDK2AP2O75956 126 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 OBSL1O75147 1896 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 IGHV1-58A0A0C4DH39 117 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 ZNF80P51504 273 aaPredicted RBP16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 VSIG2Q96IQ7 327 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 IGHG2P01859 326 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 SIRPDQ9H106 197 aa16.23■□□□□ 0.19
TGFBR1-202ENST00000374994 H3BQ85 93 aa16.22■□□□□ 0.19
TGFBR1-202ENST00000374994 ANGP03950 147 aaKnown RBP16.22■□□□□ 0.19
TGFBR1-202ENST00000374994 IGHV4-61A0A0C4DH41 118 aa16.22■□□□□ 0.19
TGFBR1-202ENST00000374994 U3KQK5 164 aa16.22■□□□□ 0.19
TGFBR1-202ENST00000374994 C16orf74Q96GX8 76 aa16.21■□□□□ 0.19
TGFBR1-202ENST00000374994 PLA2G5P39877 138 aa16.21■□□□□ 0.19
TGFBR1-202ENST00000374994 BLCAPP62952 87 aa16.21■□□□□ 0.18
TGFBR1-202ENST00000374994 C1orf229Q6ZS94 237 aaPredicted RBP16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 Q96MF0 132 aa16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 ODF3BA8MYP8 253 aa16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 MAPK1IP1LQ8NDC0 245 aa16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 COX7B2Q8TF08 81 aa16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 LGALS9O00182 355 aa16.2■□□□□ 0.18
TGFBR1-202ENST00000374994 IGHV4-38-2P0DP08 117 aa16.19■□□□□ 0.18
TGFBR1-202ENST00000374994 CRYGBP07316 175 aa16.19■□□□□ 0.18
TGFBR1-202ENST00000374994 UBE2DNLQ8IWF7 75 aa16.19■□□□□ 0.18
TGFBR1-202ENST00000374994 MDFICQ9P1T7 246 aa16.19■□□□□ 0.18
TGFBR1-202ENST00000374994 XCL1P47992 114 aa16.19■□□□□ 0.18
TGFBR1-202ENST00000374994 TRAV4A0A0B4J268 109 aa16.18■□□□□ 0.18
TGFBR1-202ENST00000374994 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
TGFBR1-202ENST00000374994 ODF3Q96PU9 254 aa16.18■□□□□ 0.18
TGFBR1-202ENST00000374994 C10orf105Q8TEF2 133 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 MED13LQ71F56 2210 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 TRBV7-3A0A075B6L6 115 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 NEXN-AS1Q8NBZ9 246 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 FAM236AA0A1B0GUQ0 79 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 FAM236BA0A1B0GV22 79 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 ZFP36P26651 326 aaKnown RBP16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 JMJD7-PLA2G4BH0Y9G9 81 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 ATP5G1P05496 136 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 A0A0J9YX75 114 aa16.17■□□□□ 0.18
TGFBR1-202ENST00000374994 IGHV3-30-3P0DP02 117 aa16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 DAZAP2Q15038 168 aaPredicted RBP16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 TRAV25A0A0B4J276 109 aa16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 RBX1P62877 108 aa16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 RMI2Q96E14 147 aa16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 SPANXB1Q9NS25 103 aaPredicted RBP16.16■□□□□ 0.18
TGFBR1-202ENST00000374994 PSCAO43653 123 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 TMEM258P61165 79 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 C5orf38Q86SI9 138 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 OPRPNQ99935 248 aaPredicted RBP16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 SMIM20Q8N5G0 67 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 TCL1BO95988 128 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 CCDC140Q96MF4 163 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 TMEM131Q92545 1883 aa16.15■□□□□ 0.18
TGFBR1-202ENST00000374994 NCKAP5O14513 1909 aa16.14■□□□□ 0.17
TGFBR1-202ENST00000374994 CCL24O00175 119 aa16.14■□□□□ 0.17
TGFBR1-202ENST00000374994 MRPL23Q16540 153 aaKnown RBP16.14■□□□□ 0.17
TGFBR1-202ENST00000374994 KIAA1549LQ6ZVL6 1849 aa16.14■□□□□ 0.17
TGFBR1-202ENST00000374994 MIAQ16674 131 aa16.14■□□□□ 0.17
TGFBR1-202ENST00000374994 SLURP1P55000 103 aa16.13■□□□□ 0.17
TGFBR1-202ENST00000374994 CHD3Q12873 2000 aaKnown RBP16.13■□□□□ 0.17
TGFBR1-202ENST00000374994 Q6ZUT4 128 aa16.13■□□□□ 0.17
TGFBR1-202ENST00000374994 APRG1Q8IVJ8 170 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 LINC00643Q86TS7 51 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 TRBV10-1A0A0K0K1A3 114 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 CXCL5P42830 114 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 ADORA2A-AS1P86434 159 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 PTH2Q96A98 100 aa16.12■□□□□ 0.17
TGFBR1-202ENST00000374994 J3KT08 172 aa16.11■□□□□ 0.17
TGFBR1-202ENST00000374994 UNQ9165/PRO28630Q6UXU0 137 aa16.11■□□□□ 0.17
TGFBR1-202ENST00000374994 TRAV26-1A0A087WT03 109 aa16.11■□□□□ 0.17
TGFBR1-202ENST00000374994 A0A1B0GX51 115 aa16.11■□□□□ 0.17
TGFBR1-202ENST00000374994 IGHV4OR15-8A0A075B7B6 117 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 A0A087WW49 117 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 DEFB136Q30KP8 78 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 IGHV4-30-2A0A087WSY4 118 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 EBI3Q14213 229 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 HIST2H2BCQ6DN03 193 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 KIF26AQ9ULI4 1882 aaPredicted RBP16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 PCNX2A6NKB5 2137 aa16.1■□□□□ 0.17
TGFBR1-202ENST00000374994 CLEC2BQ92478 149 aa16.09■□□□□ 0.17
TGFBR1-202ENST00000374994 A0A0J9YXY3 114 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms