RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 RPL39LQ96EH5 51 aaKnown RBP8.22□□□□□ -1.09
CXCL12-203ENST00000374429 FOXC2Q99958 501 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 EBI3Q14213 229 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 APRG1Q8IVJ8 170 aa8.22□□□□□ -1.09
CXCL12-203ENST00000374429 GCSHP23434 173 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 PDE6HQ13956 83 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 FAM159AQ6UWV7 190 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 TEX29Q8N6K0 151 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 ZNF492Q9P255 531 aa8.21□□□□□ -1.09
CXCL12-203ENST00000374429 LYPD1Q8N2G4 141 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 DAZ1Q9NQZ3 744 aaKnown RBP8.21□□□□□ -1.1
CXCL12-203ENST00000374429 TRBV20-1A0A075B6N2 111 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 GTSCR1Q86UQ5 136 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 TMEM158Q8WZ71 300 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 MAP1LC3AQ9H492 121 aa8.21□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV4OR15-8A0A075B7B6 117 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 A0A087WW49 117 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 TNFRSF6BO95407 300 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 INSL3P51460 131 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 NOTCH1P46531 2555 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 C2orf70A6NJV1 201 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 ZFAND6Q6FIF0 208 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 KLHL30-AS1Q8NEE0 82 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 SLC50A1Q9BRV3 221 aa8.2□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE12JA6NER3 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE7O76087 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 APOMO95445 188 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE12FP0CL80 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE12GP0CL81 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE12IP0CL82 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 DEFB131AP59861 70 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE4Q13068 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 ZNF56Q15929 161 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 A6NDX4 124 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 IGHG2P01859 326 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 SCRT2Q9NQ03 307 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV3-16A0A0C4DH30 117 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 H3BMG7 143 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
CXCL12-203ENST00000374429 C3orf56Q8N813 242 aa8.19□□□□□ -1.1
CXCL12-203ENST00000374429 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 OTOGQ6ZRI0 2925 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 TTC32Q5I0X7 151 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 AMTNQ6UX39 209 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 VWFP04275 2813 aa8.18□□□□□ -1.1
CXCL12-203ENST00000374429 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 ASIPP42127 132 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 MS4A6AQ9H2W1 248 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 TMEM8BA6NDV4 472 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 RNASE13Q5GAN3 156 aaKnown RBP8.17□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV7-4-1A0A0J9YVY3 117 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 FAM223BA6NKX1 122 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 FAM223AQ8IWN6 122 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 MDFICQ9P1T7 246 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 XCL2Q9UBD3 114 aa8.17□□□□□ -1.1
CXCL12-203ENST00000374429 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 MUC4Q99102 2169 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 HBDP02042 147 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 COX8AP10176 69 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 DEFB113Q30KQ7 82 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 CT83Q5H943 113 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 RAX2Q96IS3 184 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 F8W1H4 67 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 K7ERJ3 54 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 SNRPD3P62318 126 aaKnown RBP8.16□□□□□ -1.1
CXCL12-203ENST00000374429 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 VPREB3Q9UKI3 123 aa8.16□□□□□ -1.1
CXCL12-203ENST00000374429 CCDC179H3BU77 68 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 NDUFA4O00483 81 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
CXCL12-203ENST00000374429 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 RASL11AQ6T310 242 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 HIVEP1P15822 2718 aa8.15□□□□□ -1.1
CXCL12-203ENST00000374429 CFHR3Q02985 330 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 Q6ZUT4 128 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 C9orf139Q6ZV77 190 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 C2orf91Q6ZV80 131 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 GPHB5Q86YW7 130 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 MYOZ3Q8TDC0 251 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.11
CXCL12-203ENST00000374429 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 USMG5Q96IX5 58 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms