RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-202ENST00000373162 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
TRAPPC3-202ENST00000373162 CXCL1P09341 107 aa12.04□□□□□ -0.48
TRAPPC3-202ENST00000373162 Q8N1X5 172 aa12.04□□□□□ -0.48
TRAPPC3-202ENST00000373162 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
TRAPPC3-202ENST00000373162 RHODO00212 210 aa12.03□□□□□ -0.48
TRAPPC3-202ENST00000373162 Q8N3U1 123 aa12.03□□□□□ -0.48
TRAPPC3-202ENST00000373162 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
TRAPPC3-202ENST00000373162 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
TRAPPC3-202ENST00000373162 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
TRAPPC3-202ENST00000373162 A0A1B0GV50 99 aa12.02□□□□□ -0.49
TRAPPC3-202ENST00000373162 S100A9P06702 114 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-202ENST00000373162 CCL20P78556 96 aa12.02□□□□□ -0.49
TRAPPC3-202ENST00000373162 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 GAGE1Q13065 139 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 GAGE4Q13068 117 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 GAGE5Q13069 117 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 LAGE3Q14657 143 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 OR10J3Q5JRS4 329 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-202ENST00000373162 TMSB15BA0A087X1C1 80 aa12□□□□□ -0.49
TRAPPC3-202ENST00000373162 SNAI2O43623 268 aa12□□□□□ -0.49
TRAPPC3-202ENST00000373162 XGP55808 180 aa12□□□□□ -0.49
TRAPPC3-202ENST00000373162 KRTAP10-1P60331 282 aa12□□□□□ -0.49
TRAPPC3-202ENST00000373162 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
TRAPPC3-202ENST00000373162 TEX261Q6UWH6 196 aa12□□□□□ -0.49
TRAPPC3-202ENST00000373162 TEX46H3BTG2 121 aa11.99□□□□□ -0.49
TRAPPC3-202ENST00000373162 EREGO14944 169 aa11.99□□□□□ -0.49
TRAPPC3-202ENST00000373162 BLOC1S1P78537 153 aa11.99□□□□□ -0.49
TRAPPC3-202ENST00000373162 ZFP82Q8N141 532 aa11.99□□□□□ -0.49
TRAPPC3-202ENST00000373162 PHLDA3Q9Y5J5 127 aa11.99□□□□□ -0.49
TRAPPC3-202ENST00000373162 A0A087WWL8 130 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 IGHV3-33P01772 117 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 BAGE2Q86Y30 109 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
TRAPPC3-202ENST00000373162 FAT1Q14517 4588 aa11.97□□□□□ -0.49
TRAPPC3-202ENST00000373162 M0R381 172 aa11.97□□□□□ -0.49
TRAPPC3-202ENST00000373162 IGLV2-8P01709 118 aa11.97□□□□□ -0.49
TRAPPC3-202ENST00000373162 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
TRAPPC3-202ENST00000373162 MANBALQ9NQG1 85 aa11.97□□□□□ -0.49
TRAPPC3-202ENST00000373162 HERC1Q15751 4861 aa11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 OR5AL1P0C617 328 aa11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 OR10G8Q8NGN5 311 aa11.96□□□□□ -0.49
TRAPPC3-202ENST00000373162 A0A087WWC5 75 aa11.95□□□□□ -0.5
TRAPPC3-202ENST00000373162 UBE2D3P61077 147 aa11.95□□□□□ -0.5
TRAPPC3-202ENST00000373162 UBE2D2P62837 147 aa11.95□□□□□ -0.5
TRAPPC3-202ENST00000373162 WFDC2Q14508 124 aa11.95□□□□□ -0.5
TRAPPC3-202ENST00000373162 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 NIT1Q86X76 327 aa11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 Q9HAA7 133 aa11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
TRAPPC3-202ENST00000373162 TRBV20OR9-2A0A075B6H5 130 aa11.93□□□□□ -0.5
TRAPPC3-202ENST00000373162 Q8N814 137 aa11.93□□□□□ -0.5
TRAPPC3-202ENST00000373162 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
TRAPPC3-202ENST00000373162 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC3-202ENST00000373162 DNAH8Q96JB1 4490 aa11.93□□□□□ -0.5
TRAPPC3-202ENST00000373162 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
TRAPPC3-202ENST00000373162 IFNA1P01562 189 aa11.92□□□□□ -0.5
TRAPPC3-202ENST00000373162 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
TRAPPC3-202ENST00000373162 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
TRAPPC3-202ENST00000373162 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
TRAPPC3-202ENST00000373162 RAB4BP61018 213 aa11.91□□□□□ -0.5
TRAPPC3-202ENST00000373162 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
TRAPPC3-202ENST00000373162 SMIM12Q96EX1 92 aa11.91□□□□□ -0.5
TRAPPC3-202ENST00000373162 PSCAO43653 123 aa11.9□□□□□ -0.5
TRAPPC3-202ENST00000373162 GCSHP23434 173 aa11.9□□□□□ -0.5
TRAPPC3-202ENST00000373162 MEF2BQ02080 365 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC3-202ENST00000373162 DNAJC30Q96LL9 226 aa11.9□□□□□ -0.5
TRAPPC3-202ENST00000373162 CHCHD7Q9BUK0 85 aa11.9□□□□□ -0.5
TRAPPC3-202ENST00000373162 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
TRAPPC3-202ENST00000373162 BCL2P10415 239 aa11.89□□□□□ -0.51
TRAPPC3-202ENST00000373162 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
TRAPPC3-202ENST00000373162 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
TRAPPC3-202ENST00000373162 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
TRAPPC3-202ENST00000373162 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 IFITM2Q01629 132 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 TMEM70Q9BUB7 260 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
TRAPPC3-202ENST00000373162 VPS13BQ7Z7G8 4022 aa11.87□□□□□ -0.51
TRAPPC3-202ENST00000373162 DMBT1Q9UGM3 2413 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC3-202ENST00000373162 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
TRAPPC3-202ENST00000373162 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
TRAPPC3-202ENST00000373162 PDE6DO43924 150 aa11.86□□□□□ -0.51
TRAPPC3-202ENST00000373162 GZMBP10144 247 aa11.86□□□□□ -0.51
TRAPPC3-202ENST00000373162 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms