RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FAM236BA0A1B0GV22 79 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 Q6ZSR3 168 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 PRAC2D3DTV9 90 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 CTRLP40313 264 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 TEX22C9J3V5 150 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 PRB2P02812 416 aaPredicted RBP8.87□□□□□ -0.99
VCL-202ENST00000372755 KLK12Q9UKR0 248 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 H3BT86 120 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 TMEM263Q8WUH6 116 aaKnown RBP8.86□□□□□ -0.99
VCL-202ENST00000372755 MED12Q93074 2177 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 IGHV1-58A0A0C4DH39 117 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 TRBV12-3P01733 135 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 GTSF1Q8WW33 167 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 FAM167A-AS1Q96KT0 104 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 FER1L5A0AVI2 2057 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 PHF3Q92576 2039 aaKnown RBP8.86□□□□□ -0.99
VCL-202ENST00000372755 WT1P19544 449 aaPredicted RBP8.86□□□□□ -0.99
VCL-202ENST00000372755 COX7BP24311 80 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 PLXNA4Q9HCM2 1894 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 J3KT08 172 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 ADORA2A-AS1P86434 159 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 TICRRQ7Z2Z1 1910 aa8.86□□□□□ -0.99
VCL-202ENST00000372755 H0Y9J4 135 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 MIR7-3HGQ8N6C7 128 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 FXYD2P54710 66 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 RNF138Q8WVD3 245 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 PI4KAP42356 2102 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 FNDC1Q4ZHG4 1894 aaPredicted RBP8.85□□□□□ -0.99
VCL-202ENST00000372755 VWA8A3KMH1 1905 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 TRBV10-1A0A0K0K1A3 114 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 SPATA25Q9BR10 227 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 KIAA1671Q9BY89 1806 aa8.85□□□□□ -0.99
VCL-202ENST00000372755 TCF20Q9UGU0 1960 aaKnown RBP8.84□□□□□ -0.99
VCL-202ENST00000372755 GVINP1Q7Z2Y8 2422 aa8.84□□□□□ -0.99
VCL-202ENST00000372755 CLEC2BQ92478 149 aa8.84□□□□□ -1
VCL-202ENST00000372755 Q8N7P7 452 aa8.83□□□□□ -1
VCL-202ENST00000372755 C20orf203Q8NBC4 194 aa8.83□□□□□ -1
VCL-202ENST00000372755 FOXI1Q12951 378 aa8.83□□□□□ -1
VCL-202ENST00000372755 POLEQ07864 2286 aa8.83□□□□□ -1
VCL-202ENST00000372755 A0A0J9YX75 114 aa8.83□□□□□ -1
VCL-202ENST00000372755 DEFB4AO15263 64 aa8.83□□□□□ -1
VCL-202ENST00000372755 NUPR1O60356 82 aa8.83□□□□□ -1
VCL-202ENST00000372755 IGLV1-47P01700 117 aa8.83□□□□□ -1
VCL-202ENST00000372755 DOPEY2Q9Y3R5 2298 aa8.83□□□□□ -1
VCL-202ENST00000372755 ZFP36P26651 326 aaKnown RBP8.83□□□□□ -1
VCL-202ENST00000372755 CRYGBP07316 175 aa8.83□□□□□ -1
VCL-202ENST00000372755 SIRPDQ9H106 197 aa8.82□□□□□ -1
VCL-202ENST00000372755 SPTBN1Q01082 2364 aaKnown RBP8.82□□□□□ -1
VCL-202ENST00000372755 ABCA4P78363 2273 aa8.82□□□□□ -1
VCL-202ENST00000372755 A6NDX4 124 aa8.81□□□□□ -1
VCL-202ENST00000372755 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
VCL-202ENST00000372755 WFDC2Q14508 124 aa8.81□□□□□ -1
VCL-202ENST00000372755 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
VCL-202ENST00000372755 NFE4Q86UQ8 179 aa8.81□□□□□ -1
VCL-202ENST00000372755 WDR81Q562E7 1941 aa8.81□□□□□ -1
VCL-202ENST00000372755 ODF1Q14990 250 aa8.81□□□□□ -1
VCL-202ENST00000372755 MAP6D1Q9H9H5 199 aa8.81□□□□□ -1
VCL-202ENST00000372755 NRGNQ92686 78 aa8.8□□□□□ -1
VCL-202ENST00000372755 MDFICQ9P1T7 246 aa8.8□□□□□ -1
VCL-202ENST00000372755 MIAQ16674 131 aa8.8□□□□□ -1
VCL-202ENST00000372755 ODF3L1Q8IXM7 274 aa8.8□□□□□ -1
VCL-202ENST00000372755 KIR2DL5BQ8NHK3 375 aa8.8□□□□□ -1
VCL-202ENST00000372755 IGKV4-1P06312 121 aa8.8□□□□□ -1
VCL-202ENST00000372755 C11orf45Q8TAV5 145 aa8.8□□□□□ -1
VCL-202ENST00000372755 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
VCL-202ENST00000372755 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
VCL-202ENST00000372755 TAX1BP3O14907 124 aa8.78□□□□□ -1
VCL-202ENST00000372755 NDUFA11Q86Y39 141 aa8.78□□□□□ -1
VCL-202ENST00000372755 PLXNA2O75051 1894 aa8.78□□□□□ -1
VCL-202ENST00000372755 BPY2O14599 106 aa8.78□□□□□ -1
VCL-202ENST00000372755 ODF3Q96PU9 254 aa8.78□□□□□ -1
VCL-202ENST00000372755 CNOT1A5YKK6 2376 aaKnown RBP8.78□□□□□ -1
VCL-202ENST00000372755 UNQ9165/PRO28630Q6UXU0 137 aa8.78□□□□□ -1
VCL-202ENST00000372755 Q6ZUT4 128 aa8.78□□□□□ -1
VCL-202ENST00000372755 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
VCL-202ENST00000372755 USF3Q68DE3 2245 aa8.78□□□□□ -1
VCL-202ENST00000372755 C19orf71A6NCJ1 209 aa8.78□□□□□ -1
VCL-202ENST00000372755 DNAJC9-AS1A6NH13 148 aa8.78□□□□□ -1
VCL-202ENST00000372755 LINC00643Q86TS7 51 aa8.78□□□□□ -1
VCL-202ENST00000372755 COL6A6A6NMZ7 2263 aa8.77□□□□□ -1
VCL-202ENST00000372755 TDRG1Q3Y452 100 aa8.77□□□□□ -1
VCL-202ENST00000372755 ACACAQ13085 2346 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 FBXL19-AS1Q494R0 122 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 H7C423 109 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 SMIM9A6NGZ8 99 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 DEFB1P60022 68 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 REG3AQ06141 175 aa8.77□□□□□ -1.01
VCL-202ENST00000372755 IGKV2D-26A0A0A0MRZ7 120 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
VCL-202ENST00000372755 LOXL1Q08397 574 aaPredicted RBP8.76□□□□□ -1.01
VCL-202ENST00000372755 UPK3BQ9BT76 320 aa8.76□□□□□ -1.01
VCL-202ENST00000372755 LYRM9A8MSI8 78 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms