RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TSPOP30536 169 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 CDKN1BP46527 198 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 MIEN1Q9BRT3 115 aa11.78□□□□□ -0.52
C9orf78-201ENST00000372447 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
C9orf78-201ENST00000372447 HBDP02042 147 aa11.77□□□□□ -0.52
C9orf78-201ENST00000372447 Q8N1Y9 231 aa11.77□□□□□ -0.52
C9orf78-201ENST00000372447 MRAP2Q96G30 205 aa11.77□□□□□ -0.52
C9orf78-201ENST00000372447 TRAV12-2A0A075B6T6 113 aa11.77□□□□□ -0.53
C9orf78-201ENST00000372447 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.53
C9orf78-201ENST00000372447 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
C9orf78-201ENST00000372447 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.53
C9orf78-201ENST00000372447 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
C9orf78-201ENST00000372447 NRACQ8N912 160 aa11.77□□□□□ -0.53
C9orf78-201ENST00000372447 NXPH4O95158 308 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 DEFB131AP59861 70 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 MAJINQ3KP22 176 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 AMTNQ6UX39 209 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 DPH3P1Q9H4G8 78 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 C19orf73Q9NVV2 129 aa11.76□□□□□ -0.53
C9orf78-201ENST00000372447 PRSS47A8MTI9 375 aa11.75□□□□□ -0.53
C9orf78-201ENST00000372447 FXYD7P58549 80 aa11.75□□□□□ -0.53
C9orf78-201ENST00000372447 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
C9orf78-201ENST00000372447 DEFB125Q8N687 156 aa11.75□□□□□ -0.53
C9orf78-201ENST00000372447 C14orf178Q8N769 122 aaPredicted RBP11.75□□□□□ -0.53
C9orf78-201ENST00000372447 Q8N8P6 123 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 H0Y8G0 127 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 K7EIL1 84 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 WFDC10AQ9H1F0 79 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
C9orf78-201ENST00000372447 IGHV1OR15-1A0A075B7D0 117 aa11.73□□□□□ -0.53
C9orf78-201ENST00000372447 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
C9orf78-201ENST00000372447 MAP6D1Q9H9H5 199 aa11.73□□□□□ -0.53
C9orf78-201ENST00000372447 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
C9orf78-201ENST00000372447 IGHV3-16A0A0C4DH30 117 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 A8MTW9 85 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 OR11H12B2RN74 326 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 H3BMM0 161 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 FCER1GP30273 86 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 ZNF124Q15973 351 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 C9orf85Q96MD7 179 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 UQCR10Q9UDW1 63 aa11.72□□□□□ -0.53
C9orf78-201ENST00000372447 MGPP08493 103 aa11.71□□□□□ -0.54
C9orf78-201ENST00000372447 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.54
C9orf78-201ENST00000372447 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
C9orf78-201ENST00000372447 RASL10AQ92737 203 aa11.7□□□□□ -0.54
C9orf78-201ENST00000372447 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
C9orf78-201ENST00000372447 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
C9orf78-201ENST00000372447 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
C9orf78-201ENST00000372447 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 IGHV4-30-4P0DP06 118 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
C9orf78-201ENST00000372447 FBN3Q75N90 2809 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 LAGE3Q14657 143 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 C20orf78Q9BR46 151 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
C9orf78-201ENST00000372447 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1BA6NDE4 496 aaKnown RBP11.68□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1EA6NEQ0 496 aaKnown RBP11.68□□□□□ -0.54
C9orf78-201ENST00000372447 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 M0R143 59 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1DP0C7P1 496 aaKnown RBP11.68□□□□□ -0.54
C9orf78-201ENST00000372447 LINC00315P59091 139 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
C9orf78-201ENST00000372447 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
C9orf78-201ENST00000372447 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 EREGO14944 169 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 TCAPO15273 167 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 PPP1R17O96001 155 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
C9orf78-201ENST00000372447 Q6ZN92 141 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 MRPL52Q86TS9 123 aaKnown RBP11.67□□□□□ -0.54
C9orf78-201ENST00000372447 SYT8Q8NBV8 401 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 MRAPQ8TCY5 172 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 RPL39LQ96EH5 51 aaKnown RBP11.67□□□□□ -0.54
C9orf78-201ENST00000372447 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 JPT2Q9H910 190 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 AGRNO00468 2067 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 C18orf15Q96N68 181 aa11.67□□□□□ -0.54
C9orf78-201ENST00000372447 MUC4Q99102 2169 aa11.66□□□□□ -0.54
C9orf78-201ENST00000372447 CBY3A6NI87 242 aa11.66□□□□□ -0.54
C9orf78-201ENST00000372447 A8MZ25 164 aa11.66□□□□□ -0.54
C9orf78-201ENST00000372447 GOLT1BQ9Y3E0 138 aa11.66□□□□□ -0.54
C9orf78-201ENST00000372447 PRKDCP78527 4128 aaKnown RBP11.65□□□□□ -0.54
C9orf78-201ENST00000372447 A0A087WWL8 130 aa11.64□□□□□ -0.55
C9orf78-201ENST00000372447 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
C9orf78-201ENST00000372447 K7EMI3 77 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms