RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 IGKV2D-40P01614 121 aaPredicted RBP7.74□□□□□ -1.17
COL5A1-202ENST00000371820 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 SBSPONQ8IVN8 264 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 OR8A1Q8NGG7 326 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 MUC7Q8TAX7 377 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 S4R3C0 116 aa7.74□□□□□ -1.17
COL5A1-202ENST00000371820 TMSB15BA0A087X1C1 80 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 TMEM213A2RRL7 107 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 NDUFA4O00483 81 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 CCL25O15444 150 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 TNFRSF6BO95407 300 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 EVI2AP22794 236 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 TAL2Q16559 108 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 CD300EQ496F6 205 aaPredicted RBP7.73□□□□□ -1.17
COL5A1-202ENST00000371820 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 LINC00173Q6ZV60 143 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 VGLL1Q99990 258 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
COL5A1-202ENST00000371820 TRAV25A0A0B4J276 109 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 C7orf71A4D174 169 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 SNAI2O43623 268 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 PRSS1P07477 247 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 ORMDL2Q53FV1 153 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 C20orf78Q9BR46 151 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
COL5A1-202ENST00000371820 TRAV21A0A0B4J279 112 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 H0Y8G0 127 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 K7ERU9 68 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 CDKN1BP46527 198 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 LAGE3Q14657 143 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 ADAMTSL5Q6ZMM2 481 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 RNF185Q96GF1 192 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 AGPAT4-IT1Q9H0P7 198 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 TIMM8BQ9Y5J9 83 aaPredicted RBP7.71□□□□□ -1.18
COL5A1-202ENST00000371820 TENM2Q9NT68 2774 aa7.71□□□□□ -1.18
COL5A1-202ENST00000371820 A0A096LNJ9 63 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 DPM2O94777 84 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 NPYP01303 97 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 IGKCP01834 107 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 SMIM13P0DJ93 91 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 LEPP41159 167 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
COL5A1-202ENST00000371820 ERASQ7Z444 233 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
COL5A1-202ENST00000371820 DAZ1Q9NQZ3 744 aaKnown RBP7.7□□□□□ -1.18
COL5A1-202ENST00000371820 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 MUC21A0A0G2JKD1 596 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 MUC21A0A140T8X8 626 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 OR11H12B2RN74 326 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 K7EMT4 169 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 M0R381 172 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 PLNP26678 52 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 ID1P41134 155 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 TM4SF20Q53R12 229 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 PAPPA-AS1Q5QFB9 102 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 MUC21Q5SSG8 566 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 TMEM61Q8N0U2 210 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 DNAH1Q9P2D7 4330 aa7.69□□□□□ -1.18
COL5A1-202ENST00000371820 STARD9Q9P2P6 4700 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.68□□□□□ -1.18
COL5A1-202ENST00000371820 CD7P09564 240 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 AMMECR1LQ6DCA0 310 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 GLMPQ8WWB7 406 aa7.68□□□□□ -1.18
COL5A1-202ENST00000371820 SPAG8Q99932 426 aaPredicted RBP7.68□□□□□ -1.18
COL5A1-202ENST00000371820 EPPK1P58107 5090 aaKnown RBP7.68□□□□□ -1.18
COL5A1-202ENST00000371820 IGKV3D-20A0A0C4DH25 116 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 LCE6AA0A183 80 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 CBY3A6NI87 242 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 H7C1H1 209 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 SMIM17P0DL12 118 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 FGF6P10767 208 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 EDN2P20800 178 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 ASIPP42127 132 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 RPL32P62910 135 aaKnown RBP7.67□□□□□ -1.18
COL5A1-202ENST00000371820 ERCC8Q13216 396 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 DPH3P1Q9H4G8 78 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
COL5A1-202ENST00000371820 A0A087WX48 190 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 TRAV8-2A0A0B4J237 113 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 S100A4P26447 101 aaKnown RBP7.66□□□□□ -1.18
COL5A1-202ENST00000371820 CMC4P56277 68 aaPredicted RBP7.66□□□□□ -1.18
COL5A1-202ENST00000371820 ODF1Q14990 250 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 Q8TAT8 98 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 EDA2RQ9HAV5 297 aa7.66□□□□□ -1.18
COL5A1-202ENST00000371820 LYSTQ99698 3801 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 IGLV2-18A0A075B6J9 118 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms