RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 TRBV7-3A0A075B6L6 115 aa17.06■□□□□ 0.32
TM9SF3-201ENST00000371142 RNF138Q8WVD3 245 aa17.06■□□□□ 0.32
TM9SF3-201ENST00000371142 BAALCQ8WXS3 180 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 E7EUB6 86 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 C9orf47Q6ZRZ4 202 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 CITED1Q99966 193 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 IGHG2P01859 326 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 LINC01545Q5VT33 79 aa17.05■□□□□ 0.32
TM9SF3-201ENST00000371142 NOTCH4Q99466 2003 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 TTTY13Q9BZ97 58 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 MALRD1Q5VYJ5 2156 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 SEM1Q6ZVN7 128 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 GTF3C1Q12789 2109 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 TDRG1Q3Y452 100 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 PKIGQ9Y2B9 76 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 IGKV3D-7A0A0C4DH55 119 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 KIR2DL5BA0A0G2JN68 375 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 KIR2DL5BA0A0G2JPC4 375 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 KIR2DL5AQ8N109 375 aa17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 OPRPNQ99935 248 aaPredicted RBP17.04■□□□□ 0.32
TM9SF3-201ENST00000371142 CLPSL1A2RUU4 121 aa17.03■□□□□ 0.32
TM9SF3-201ENST00000371142 C5orf47Q569G3 176 aa17.03■□□□□ 0.32
TM9SF3-201ENST00000371142 ODF3L1Q8IXM7 274 aa17.03■□□□□ 0.32
TM9SF3-201ENST00000371142 H0YGX0 51 aa17.02■□□□□ 0.32
TM9SF3-201ENST00000371142 IGF2-ASQ6U949 168 aa17.02■□□□□ 0.32
TM9SF3-201ENST00000371142 Q6ZSR3 168 aa17.02■□□□□ 0.32
TM9SF3-201ENST00000371142 PCNX1Q96RV3 2341 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 NDUFA1O15239 70 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 TRBV12-3P01733 135 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 UBE2AP49459 152 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 TOMM6Q96B49 74 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 VSIG2Q96IQ7 327 aa17.02■□□□□ 0.31
TM9SF3-201ENST00000371142 NUP210Q8TEM1 1887 aaPredicted RBP17.01■□□□□ 0.31
TM9SF3-201ENST00000371142 C4orf3Q8WVX3 66 aa17.01■□□□□ 0.31
TM9SF3-201ENST00000371142 TMEM258P61165 79 aa17■□□□□ 0.31
TM9SF3-201ENST00000371142 ACYP1P07311 99 aa17■□□□□ 0.31
TM9SF3-201ENST00000371142 IGLV2-14P01704 120 aa17■□□□□ 0.31
TM9SF3-201ENST00000371142 K7EMT4 169 aa16.99■□□□□ 0.31
TM9SF3-201ENST00000371142 PROP1O75360 226 aa16.99■□□□□ 0.31
TM9SF3-201ENST00000371142 FXYD2P54710 66 aa16.99■□□□□ 0.31
TM9SF3-201ENST00000371142 UNQ9165/PRO28630Q6UXU0 137 aa16.99■□□□□ 0.31
TM9SF3-201ENST00000371142 DENND4CQ5VZ89 1909 aa16.99■□□□□ 0.31
TM9SF3-201ENST00000371142 A0A1W2PNU3 283 aaPredicted RBP16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 IGLV1-47P01700 117 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 GPHB5Q86YW7 130 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 MDFICQ9P1T7 246 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 CHKB-CPT1BH3BT56 60 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 KLK12Q9UKR0 248 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 CACNA1HO95180 2353 aa16.98■□□□□ 0.31
TM9SF3-201ENST00000371142 B5MCH6 92 aa16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 ZGRF1Q86YA3 2104 aa16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 MYCNOSP40205 109 aa16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 WISP2O76076 250 aa16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 DAZAP2Q15038 168 aaPredicted RBP16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 NREPQ16612 68 aa16.97■□□□□ 0.31
TM9SF3-201ENST00000371142 COA6Q5JTJ3 125 aaKnown RBP16.96■□□□□ 0.31
TM9SF3-201ENST00000371142 MED13Q9UHV7 2174 aa16.96■□□□□ 0.31
TM9SF3-201ENST00000371142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.96■□□□□ 0.313e-8■□□□□ 11.1
TM9SF3-201ENST00000371142 A0A0B4J2C4 111 aa16.96■□□□□ 0.31
TM9SF3-201ENST00000371142 NDUFB1O75438 58 aa16.96■□□□□ 0.31
TM9SF3-201ENST00000371142 SIRPDQ9H106 197 aa16.96■□□□□ 0.31
TM9SF3-201ENST00000371142 SPAG11BQ08648 103 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 SS18L2Q9UHA2 77 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 LINC01620Q4KN68 170 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 TMEM61Q8N0U2 210 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 CLEC2BQ92478 149 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 LECT2O14960 151 aa16.95■□□□□ 0.3
TM9SF3-201ENST00000371142 WFDC9Q8NEX5 89 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 FRMD6-AS1P0C7T7 363 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 WFDC11Q8NEX6 87 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 LYPD6Q86Y78 171 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 CTRLP40313 264 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 MSMPQ1L6U9 139 aa16.94■□□□□ 0.3
TM9SF3-201ENST00000371142 C11orf86A6NJI1 115 aa16.93■□□□□ 0.3
TM9SF3-201ENST00000371142 LGALS9O00182 355 aa16.92■□□□□ 0.3
TM9SF3-201ENST00000371142 MED14OSP0DP75 135 aa16.92■□□□□ 0.3
TM9SF3-201ENST00000371142 E9PLD3 99 aa16.92■□□□□ 0.3
TM9SF3-201ENST00000371142 MIR7-3HGQ8N6C7 128 aa16.92■□□□□ 0.3
TM9SF3-201ENST00000371142 PSMB8P28062 276 aa16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 WFDC2Q14508 124 aa16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 CEMP1Q6PRD7 247 aaPredicted RBP16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 SMAD5-AS1Q9Y6J3 95 aa16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 KIF26AQ9ULI4 1882 aaPredicted RBP16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 A0A1B0GX51 115 aa16.91■□□□□ 0.3
TM9SF3-201ENST00000371142 FANCD2OSQ96PS1 177 aa16.9■□□□□ 0.3
TM9SF3-201ENST00000371142 SHANK1Q9Y566 2161 aa16.9■□□□□ 0.3
TM9SF3-201ENST00000371142 A6NDX4 124 aa16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 DIRC1Q969H9 104 aa16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 TMEM263Q8WUH6 116 aaKnown RBP16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 A0A0J9YX75 114 aa16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 MP68P56378 58 aa16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 TM2D2Q9BX73 214 aa16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 CHD3Q12873 2000 aaKnown RBP16.89■□□□□ 0.29
TM9SF3-201ENST00000371142 MAP6D1Q9H9H5 199 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 DNAJC9-AS1A6NH13 148 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 TMEM89A2RUT3 159 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 FAM236AA0A1B0GUQ0 79 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 FAM236BA0A1B0GV22 79 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 C14orf132Q9NPU4 83 aa16.88■□□□□ 0.29
TM9SF3-201ENST00000371142 CXCL5P42830 114 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms