RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 KIR2DL4Q99706 377 aa3.63□□□□□ -1.83
SGIP1-204ENST00000371039 C21orf62Q9NYP8 219 aa3.63□□□□□ -1.83
SGIP1-204ENST00000371039 KLK9Q9UKQ9 250 aa3.63□□□□□ -1.83
SGIP1-204ENST00000371039 MED13LQ71F56 2210 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 TIMM23O14925 209 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 SMIM13P0DJ93 91 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
SGIP1-204ENST00000371039 HES1Q14469 280 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 RRN3P1Q2M238 152 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 ZNF843Q8N446 348 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 NEXN-AS1Q8NBZ9 246 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 TLN1Q9Y490 2541 aaKnown RBP3.62□□□□□ -1.83
SGIP1-204ENST00000371039 IGHV4-4A0A075B6R2 117 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 ODF3BA8MYP8 253 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 LY6HO94772 140 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 IGKCP01834 107 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 NPBQ8NG41 125 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 CCL17Q92583 94 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 C9orf85Q96MD7 179 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 NACAE9PAV3 2078 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 LINC01619G3V211 115 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 CKS2P33552 79 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 PDE6HQ13956 83 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 TWIST1Q15672 202 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 RNASE6Q93091 150 aaKnown RBP3.62□□□□□ -1.83
SGIP1-204ENST00000371039 FOXC2Q99958 501 aa3.62□□□□□ -1.83
SGIP1-204ENST00000371039 CEP295Q9C0D2 2601 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 OOSP1A8MZH6 123 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 SUB1P53999 127 aaKnown RBP eCLIP3.61□□□□□ -1.83
SGIP1-204ENST00000371039 Q8N8P6 123 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 ATP6V0E2Q8NHE4 81 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 VKORC1Q9BQB6 163 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 AGPAT4-IT1Q9H0P7 198 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 APOMO95445 188 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 VMA21Q3ZAQ7 101 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 ZNF502Q8TBZ5 544 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 RPL39LQ96EH5 51 aaKnown RBP3.61□□□□□ -1.83
SGIP1-204ENST00000371039 CCDC140Q96MF4 163 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 ATRXP46100 2492 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 ABCA4P78363 2273 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 IGHV3-35A0A0C4DH35 117 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 IGFL3Q6UXB1 125 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 Q6ZS92 163 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 OR10J6PQ8NGY7 276 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 CHD8Q9HCK8 2581 aa3.61□□□□□ -1.83
SGIP1-204ENST00000371039 MAP1BP46821 2468 aaKnown RBP3.61□□□□□ -1.83
SGIP1-204ENST00000371039 BUB3O43684 328 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C10orf126Q8N4M7 172 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 FAM19A4Q96LR4 140 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 ZNF580Q9UK33 172 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C9orf153Q5TBE3 101 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C9orf47Q6ZRZ4 202 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C14orf178Q8N769 122 aaPredicted RBP3.6□□□□□ -1.83
SGIP1-204ENST00000371039 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 SPTBN1Q01082 2364 aaKnown RBP3.6□□□□□ -1.83
SGIP1-204ENST00000371039 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 ACACAQ13085 2346 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 IGHV7-81A0A0B4J1V7 117 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 J3QQQ9 107 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 PRB1P04280 392 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 TRAV17A0A0B4J275 112 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 TMEM262E9PQX1 116 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 SOCS3O14543 225 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 SNCGO76070 127 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 DPM2O94777 84 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 TCL1BO95988 128 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 VPREB1P12018 145 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C19orf54Q5BKX5 351 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 LYRM7Q5U5X0 104 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 C11orf45Q8TAV5 145 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 ITLN2Q8WWU7 325 aaPredicted RBP3.6□□□□□ -1.83
SGIP1-204ENST00000371039 PYGO1Q9Y3Y4 419 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 U3KQE9 123 aa3.6□□□□□ -1.83
SGIP1-204ENST00000371039 CFAP46Q8IYW2 2715 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 A0A1W2PPR1 153 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 CFC1BP0CG36 223 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 CFC1P0CG37 223 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 RPL13AP40429 203 aaKnown RBP3.59□□□□□ -1.83
SGIP1-204ENST00000371039 ZFAND2AQ8N6M9 145 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 OR11H6Q8NGC7 330 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 DEFB104AQ8WTQ1 72 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 Q9UF83 564 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 A0A0U1RQV1 116 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 COX7A1P24310 79 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 PFN2P35080 140 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 HILS1P60008 231 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 DEFB109BQ30KR1 87 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
SGIP1-204ENST00000371039 TRAV12-1A0A0B4J245 112 aa3.59□□□□□ -1.84
SGIP1-204ENST00000371039 A0A0J9YY99 117 aa3.59□□□□□ -1.84
SGIP1-204ENST00000371039 MYMXA0A1B0GTQ4 84 aa3.59□□□□□ -1.84
SGIP1-204ENST00000371039 NDUFB3O43676 98 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms