RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 Q9H8V8 135 aa10.38□□□□□ -0.75
SS18L1-202ENST00000370848 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 SNAI2O43623 268 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 SSTP61278 116 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 OR2D3Q8NGH3 330 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 SMIM12Q96EX1 92 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
SS18L1-202ENST00000370848 Q9UF83 564 aa10.37□□□□□ -0.75
SS18L1-202ENST00000370848 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 NXPH4O95158 308 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 CRYGDP07320 174 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 RHOHQ15669 191 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
SS18L1-202ENST00000370848 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
SS18L1-202ENST00000370848 SFRP2Q96HF1 295 aa10.36□□□□□ -0.75
SS18L1-202ENST00000370848 CIDEAO60543 219 aa10.35□□□□□ -0.75
SS18L1-202ENST00000370848 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
SS18L1-202ENST00000370848 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
SS18L1-202ENST00000370848 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
SS18L1-202ENST00000370848 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
SS18L1-202ENST00000370848 P01737 135 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
SS18L1-202ENST00000370848 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
SS18L1-202ENST00000370848 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 C9JQL5 133 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
SS18L1-202ENST00000370848 GAGE1Q13065 139 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 GAGE4Q13068 117 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 GAGE5Q13069 117 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
SS18L1-202ENST00000370848 RHODO00212 210 aa10.32□□□□□ -0.76
SS18L1-202ENST00000370848 LINC00694P0DN24 101 aa10.32□□□□□ -0.76
SS18L1-202ENST00000370848 RPS20P60866 119 aaKnown RBP10.32□□□□□ -0.76
SS18L1-202ENST00000370848 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
SS18L1-202ENST00000370848 Q8N1X5 172 aa10.32□□□□□ -0.76
SS18L1-202ENST00000370848 FER1L6-AS1Q8NA97 138 aa10.32□□□□□ -0.76
SS18L1-202ENST00000370848 SIVA1O15304 175 aa10.31□□□□□ -0.76
SS18L1-202ENST00000370848 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
SS18L1-202ENST00000370848 SMIM7Q9BQ49 75 aa10.31□□□□□ -0.76
SS18L1-202ENST00000370848 BIN3Q9NQY0 253 aa10.31□□□□□ -0.76
SS18L1-202ENST00000370848 MSRB1Q9NZV6 116 aa10.31□□□□□ -0.76
SS18L1-202ENST00000370848 MAPKAPK5-AS1Q8N8E1 139 aa10.3□□□□□ -0.76
SS18L1-202ENST00000370848 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
SS18L1-202ENST00000370848 ZNF727A8MUV8 499 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 ZNF56Q15929 161 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 SPATA12Q7Z6I5 190 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 KIF25-AS1Q9Y6Z4 181 aa10.29□□□□□ -0.76
SS18L1-202ENST00000370848 HERC1Q15751 4861 aa10.28□□□□□ -0.76
SS18L1-202ENST00000370848 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
SS18L1-202ENST00000370848 TIRAPP58753 221 aa10.28□□□□□ -0.76
SS18L1-202ENST00000370848 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
SS18L1-202ENST00000370848 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
SS18L1-202ENST00000370848 LINC01551Q86U37 167 aa10.28□□□□□ -0.76
SS18L1-202ENST00000370848 XKRY2A2RUG3 117 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
SS18L1-202ENST00000370848 LINC00315P59091 139 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 GTSF1Q8WW33 167 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 GTSF1LQ9H1H1 148 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 TNFRSF18Q9Y5U5 241 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
SS18L1-202ENST00000370848 CTRLP40313 264 aa10.26□□□□□ -0.77
SS18L1-202ENST00000370848 RAB4BP61018 213 aa10.26□□□□□ -0.77
SS18L1-202ENST00000370848 CACNG7P62955 275 aa10.26□□□□□ -0.77
SS18L1-202ENST00000370848 FAM231DQ6ZW35 169 aa10.26□□□□□ -0.77
SS18L1-202ENST00000370848 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SS18L1-202ENST00000370848 F5H697 171 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 MGPP08493 103 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 DNAH10OSP0CZ25 163 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 ERVFC1-1P60608 527 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 LELP1Q5T871 98 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 Q8N3U1 123 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 NEXN-AS1Q8NBZ9 246 aa10.25□□□□□ -0.77
SS18L1-202ENST00000370848 F2Z2F3 143 aa10.24□□□□□ -0.77
SS18L1-202ENST00000370848 SMIM17P0DL12 118 aa10.24□□□□□ -0.77
SS18L1-202ENST00000370848 NTF3P20783 257 aa10.24□□□□□ -0.77
SS18L1-202ENST00000370848 EVI2AP22794 236 aa10.24□□□□□ -0.77
SS18L1-202ENST00000370848 PEA15Q15121 130 aa10.24□□□□□ -0.77
SS18L1-202ENST00000370848 TRBV10-1A0A0K0K1A3 114 aa10.23□□□□□ -0.77
SS18L1-202ENST00000370848 UBE2D3P61077 147 aa10.23□□□□□ -0.77
SS18L1-202ENST00000370848 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
SS18L1-202ENST00000370848 UBE2D2P62837 147 aa10.23□□□□□ -0.77
SS18L1-202ENST00000370848 IFITM2Q01629 132 aa10.23□□□□□ -0.77
SS18L1-202ENST00000370848 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms