RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 Q8N1Y9 231 aa12.75□□□□□ -0.37
DKC1-201ENST00000369550 F5H697 171 aa12.75□□□□□ -0.37
DKC1-201ENST00000369550 IGHV4-39P01824 125 aa12.75□□□□□ -0.37
DKC1-201ENST00000369550 OOSP1A8MZH6 123 aa12.74□□□□□ -0.37
DKC1-201ENST00000369550 BEX4Q9NWD9 120 aaPredicted RBP12.74□□□□□ -0.37
DKC1-201ENST00000369550 SPTBN2O15020 2390 aa12.74□□□□□ -0.37
DKC1-201ENST00000369550 CCDC179H3BU77 68 aa12.74□□□□□ -0.37
DKC1-201ENST00000369550 M0QXV9 152 aa12.74□□□□□ -0.37
DKC1-201ENST00000369550 ATXN8Q156A1 80 aa12.74□□□□□ -0.37
DKC1-201ENST00000369550 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 TRBV7-1A0A0A6YYK4 115 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 TMEM263Q8WUH6 116 aaKnown RBP12.73□□□□□ -0.37
DKC1-201ENST00000369550 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
DKC1-201ENST00000369550 AMELXQ99217 191 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 TIMM17AQ99595 171 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 VCYO14598 125 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 RNASE3P12724 160 aaKnown RBP12.73□□□□□ -0.37
DKC1-201ENST00000369550 RPL11P62913 178 aaKnown RBP12.73□□□□□ -0.37
DKC1-201ENST00000369550 ZNF876PQ49A33 203 aa12.73□□□□□ -0.37
DKC1-201ENST00000369550 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 MINOS1Q5TGZ0 78 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 MINOS1-NBL1R4GNA1 71 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 U3KQE9 123 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 LINC01620Q4KN68 170 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 MUSTN1Q8IVN3 82 aa12.72□□□□□ -0.37
DKC1-201ENST00000369550 MED13LQ71F56 2210 aa12.71□□□□□ -0.37
DKC1-201ENST00000369550 A0A087WWL8 130 aa12.71□□□□□ -0.37
DKC1-201ENST00000369550 OVOL1O14753 267 aa12.71□□□□□ -0.37
DKC1-201ENST00000369550 EIF4EBP3O60516 100 aaPredicted RBP12.71□□□□□ -0.37
DKC1-201ENST00000369550 ELANEP08246 267 aa12.71□□□□□ -0.37
DKC1-201ENST00000369550 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
DKC1-201ENST00000369550 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
DKC1-201ENST00000369550 A0A0B4J2C4 111 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 F6UB75 175 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 P0DMU3 169 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 FAM231AP0DMU4 169 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 FAM231CP0DMU5 169 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 JPT2Q9H910 190 aa12.71□□□□□ -0.38
DKC1-201ENST00000369550 CEP295Q9C0D2 2601 aa12.7□□□□□ -0.38
DKC1-201ENST00000369550 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
DKC1-201ENST00000369550 IGKV3-7A0A075B6H7 116 aa12.7□□□□□ -0.38
DKC1-201ENST00000369550 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
DKC1-201ENST00000369550 A0A087WW49 117 aa12.7□□□□□ -0.38
DKC1-201ENST00000369550 ZNF256Q9Y2P7 627 aaPredicted RBP12.7□□□□□ -0.38
DKC1-201ENST00000369550 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
DKC1-201ENST00000369550 UCNP55089 124 aa12.69□□□□□ -0.38
DKC1-201ENST00000369550 C15orf53Q8NAA6 179 aa12.69□□□□□ -0.38
DKC1-201ENST00000369550 RPL32P62910 135 aaKnown RBP12.69□□□□□ -0.38
DKC1-201ENST00000369550 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
DKC1-201ENST00000369550 OPRPNQ99935 248 aaPredicted RBP12.69□□□□□ -0.38
DKC1-201ENST00000369550 TRBV7-9A0A0J9YWB2 115 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 LEPROTO15243 131 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 LINC00315P59091 139 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 FAM74A4Q5TZK3 123 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 SMIM20Q8N5G0 67 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 H3BMM0 161 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
DKC1-201ENST00000369550 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
DKC1-201ENST00000369550 RELNP78509 3460 aa12.67□□□□□ -0.38
DKC1-201ENST00000369550 TMEM223A0PJW6 202 aa12.67□□□□□ -0.38
DKC1-201ENST00000369550 Q6Q795 121 aa12.67□□□□□ -0.38
DKC1-201ENST00000369550 PTPRQQ9UMZ3 2332 aa12.66□□□□□ -0.38
DKC1-201ENST00000369550 TRBV10-2A0A0K0K1G8 114 aa12.66□□□□□ -0.38
DKC1-201ENST00000369550 RPL13AP40429 203 aaKnown RBP12.66□□□□□ -0.38
DKC1-201ENST00000369550 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
DKC1-201ENST00000369550 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
DKC1-201ENST00000369550 TRIAP1O43715 76 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 HERV-K104P63124 156 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 KLK9Q2XQG4 91 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 KLK9Q9UKQ9 250 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 MUC4Q99102 2169 aa12.65□□□□□ -0.38
DKC1-201ENST00000369550 NXPH4O95158 308 aa12.65□□□□□ -0.39
DKC1-201ENST00000369550 PRSS2P07478 247 aa12.65□□□□□ -0.39
DKC1-201ENST00000369550 ZFP36P26651 326 aaKnown RBP12.65□□□□□ -0.39
DKC1-201ENST00000369550 GRNP28799 593 aaKnown RBP12.65□□□□□ -0.39
DKC1-201ENST00000369550 TRBV27A0A0K0K1C4 114 aa12.64□□□□□ -0.39
DKC1-201ENST00000369550 M0R2P5 195 aa12.64□□□□□ -0.39
DKC1-201ENST00000369550 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
DKC1-201ENST00000369550 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
DKC1-201ENST00000369550 LGALS9O00182 355 aa12.63□□□□□ -0.39
DKC1-201ENST00000369550 SOCS3O14543 225 aa12.63□□□□□ -0.39
DKC1-201ENST00000369550 SHISA2Q6UWI4 295 aa12.63□□□□□ -0.39
DKC1-201ENST00000369550 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
DKC1-201ENST00000369550 TRBV30A0A0K0K1B3 111 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 ZNF22P17026 224 aaPredicted RBP12.62□□□□□ -0.39
DKC1-201ENST00000369550 SAA4P35542 130 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 ZNF56Q15929 161 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 FAM110AQ9BQ89 295 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
DKC1-201ENST00000369550 TLN1Q9Y490 2541 aaKnown RBP12.62□□□□□ -0.39
DKC1-201ENST00000369550 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
DKC1-201ENST00000369550 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms