RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ZFHX3Q15911 3703 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 DUSP14O95147 198 aaKnown RBP7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 NXPH4O95158 308 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 TSHBP01222 138 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 RPL13AP40429 203 aaKnown RBP7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 C15orf32Q32M92 178 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 Q6ZS46 218 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 GPHB5Q86YW7 130 aa7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 ITLN2Q8WWU7 325 aaPredicted RBP7.96□□□□□ -1.13
LYSMD1-201ENST00000368908 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 A0A087WW49 117 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 C9JAW5 83 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 LYNX1G3V0Z9 82 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV3-33P01772 117 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 LYNX1P0DP58 116 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV3-35A0A0C4DH35 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 B5MCH6 92 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 MGPP08493 103 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 MINOS1Q5TGZ0 78 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 Q6ZQT7 251 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 ZFAND2AQ8N6M9 145 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 MINOS1-NBL1R4GNA1 71 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 ZNF462Q96JM2 2506 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE7O76087 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE12FP0CL80 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE12GP0CL81 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE12IP0CL82 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 GAGE4Q13068 117 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 C14orf178Q8N769 122 aaPredicted RBP7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 FAM110AQ9BQ89 295 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 TP53TG1Q9Y2A0 90 aa7.95□□□□□ -1.14
LYSMD1-201ENST00000368908 J3QQQ9 107 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 CD3EP07766 207 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 IFITM1P13164 125 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 S100A4P26447 101 aaKnown RBP7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 Q8N9W7 124 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 OVOL1O14753 267 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 ZNF876PQ49A33 203 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 VMO1Q7Z5L0 202 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 EEF1AKMT3Q96AZ1 226 aa7.94□□□□□ -1.14
LYSMD1-201ENST00000368908 TRBV7-1A0A0A6YYK4 115 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 TRBV7-9A0A0J9YWB2 115 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 A0A0J9YX75 114 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 LEPROTO15243 131 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 POLR2KP53803 58 aaKnown RBP7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 LINC01620Q4KN68 170 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 Q8N1Y9 231 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 C16orf92Q96LL3 132 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 TRAV4A0A0B4J268 109 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 A4D1N5 150 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 TGFAP01135 160 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 TTC32Q5I0X7 151 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 RAX2Q96IS3 184 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
LYSMD1-201ENST00000368908 CCL21O00585 134 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 TMEM170BQ5T4T1 132 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 CLEC19AQ6UXS0 136 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 NTN5Q8WTR8 489 aaPredicted RBP7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 LRRK2Q5S007 2527 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 TRAV8-4A0A0B4J246 113 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 VCYO14598 125 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV1-69P01742 117 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 LINC00315P59091 139 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 C20orf173Q96LM9 149 aa7.92□□□□□ -1.14
LYSMD1-201ENST00000368908 TENM4Q6N022 2769 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 TRBV30A0A0K0K1B3 111 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 ZNRF2Q8NHG8 242 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 TRBV6-5A0A0K0K1A5 114 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 SDHAF1A6NFY7 115 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 CRLF1O75462 422 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
LYSMD1-201ENST00000368908 ARHGAP32A7KAX9 2087 aa7.9□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV3OR16-13A0A075B7E8 117 aa7.9□□□□□ -1.14
LYSMD1-201ENST00000368908 IGHV3-74A0A0B4J1X5 117 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms