RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 C6orf223Q8N319 242 aa12.71□□□□□ -0.37
CHTOP-202ENST00000368687 FER1L6-AS1Q8NA97 138 aa12.71□□□□□ -0.37
CHTOP-202ENST00000368687 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.37
CHTOP-202ENST00000368687 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 CACNG7P62955 275 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 AP1S3Q96PC3 154 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 SAMD10Q9BYL1 202 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 JPT2Q9H910 190 aa12.7□□□□□ -0.38
CHTOP-202ENST00000368687 A0A087WWL8 130 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 RTL8CO15255 209 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 CRYGDP07320 174 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 IGLC6P0CF74 106 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 SMDT1Q9H4I9 107 aa12.69□□□□□ -0.38
CHTOP-202ENST00000368687 TRAV8-6A0A0B4J262 113 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 PRSS29PA6NIE9 313 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 EVI2AP22794 236 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 RAB4BP61018 213 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 OCC1Q8TAD7 63 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 SMIM7Q9BQ49 75 aa12.68□□□□□ -0.38
CHTOP-202ENST00000368687 RPP21Q9H633 154 aaKnown RBP12.68□□□□□ -0.38
CHTOP-202ENST00000368687 A0A087WWC5 75 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 CEBPGP53567 150 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 NUDT10Q8NFP7 164 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 NUDT11Q96G61 164 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 TPPP3Q9BW30 176 aa12.67□□□□□ -0.38
CHTOP-202ENST00000368687 DNAH2Q9P225 4427 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 K7EN84 100 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 DNAH10OSP0CZ25 163 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 LINC00694P0DN24 101 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 LELP1Q5T871 98 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 Q6ZSN1 163 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
CHTOP-202ENST00000368687 ZNF727A8MUV8 499 aa12.65□□□□□ -0.38
CHTOP-202ENST00000368687 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
CHTOP-202ENST00000368687 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
CHTOP-202ENST00000368687 PEA15Q15121 130 aa12.65□□□□□ -0.38
CHTOP-202ENST00000368687 ZNF56Q15929 161 aa12.65□□□□□ -0.38
CHTOP-202ENST00000368687 C14orf178Q8N769 122 aaPredicted RBP12.65□□□□□ -0.38
CHTOP-202ENST00000368687 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
CHTOP-202ENST00000368687 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
CHTOP-202ENST00000368687 FAT2Q9NYQ8 4349 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 IGHV3-38A0A0C4DH36 116 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GAGE12JA6NER3 117 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GZMBP10144 247 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 CTRLP40313 264 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GAGE1Q13065 139 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GAGE4Q13068 117 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GAGE5Q13069 117 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 CT83Q5H943 113 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
CHTOP-202ENST00000368687 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
CHTOP-202ENST00000368687 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 A8MWL6 223 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 KRTAP1-5Q9BYS1 174 aa12.63□□□□□ -0.39
CHTOP-202ENST00000368687 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 H7C1H1 209 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 ERVFC1-1P60608 527 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 RAB14P61106 215 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 LINC01551Q86U37 167 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
CHTOP-202ENST00000368687 F5H697 171 aa12.61□□□□□ -0.39
CHTOP-202ENST00000368687 GATCO43716 136 aaKnown RBP12.61□□□□□ -0.39
CHTOP-202ENST00000368687 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
CHTOP-202ENST00000368687 LINC00315P59091 139 aa12.6□□□□□ -0.39
CHTOP-202ENST00000368687 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
CHTOP-202ENST00000368687 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
CHTOP-202ENST00000368687 SSTP61278 116 aa12.59□□□□□ -0.39
CHTOP-202ENST00000368687 TMEM241Q24JQ0 296 aa12.59□□□□□ -0.39
CHTOP-202ENST00000368687 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
CHTOP-202ENST00000368687 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
CHTOP-202ENST00000368687 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
CHTOP-202ENST00000368687 A0A1B0GVY2 172 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 NTF3P20783 257 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 UBE2D3P61077 147 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 UBE2D2P62837 147 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 TMEM97Q5BJF2 176 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 OSTCQ9NRP0 149 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
CHTOP-202ENST00000368687 TWIST1Q15672 202 aa12.57□□□□□ -0.4
CHTOP-202ENST00000368687 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
CHTOP-202ENST00000368687 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
CHTOP-202ENST00000368687 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
CHTOP-202ENST00000368687 MGPP08493 103 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms