RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 ZNF418Q8TF45 676 aaPredicted RBP12.95□□□□□ -0.34
LMNA-205ENST00000368299 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 SIVA1O15304 175 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 MGPP08493 103 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
LMNA-205ENST00000368299 FHL3Q13643 280 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 AMMECR1LQ6DCA0 310 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 TMEM158Q8WZ71 300 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 RASL10AQ92737 203 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 RAX2Q96IS3 184 aa12.95□□□□□ -0.34
LMNA-205ENST00000368299 SYT8Q8NBV8 401 aa12.94□□□□□ -0.34
LMNA-205ENST00000368299 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
LMNA-205ENST00000368299 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
LMNA-205ENST00000368299 Q8N1Y9 231 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 UNC79Q9P2D8 2635 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 H3BMM0 161 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
LMNA-205ENST00000368299 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
LMNA-205ENST00000368299 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 KNCNA6PVL3 124 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 ATP5LO75964 103 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 HSD52Q0P140 79 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 ORMDL2Q53FV1 153 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 DKK2Q9UBU2 259 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 CCL24O00175 119 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 CD28P10747 220 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
LMNA-205ENST00000368299 LINC00315P59091 139 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 HILS1P60008 231 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
LMNA-205ENST00000368299 A6NDN8 102 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
LMNA-205ENST00000368299 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
LMNA-205ENST00000368299 ODF1Q14990 250 aa12.9□□□□□ -0.34
LMNA-205ENST00000368299 MUC4Q99102 2169 aa12.9□□□□□ -0.34
LMNA-205ENST00000368299 H3BRM9 83 aa12.9□□□□□ -0.35
LMNA-205ENST00000368299 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.35
LMNA-205ENST00000368299 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.35
LMNA-205ENST00000368299 RPL39LQ96EH5 51 aaKnown RBP12.9□□□□□ -0.35
LMNA-205ENST00000368299 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
LMNA-205ENST00000368299 NMUP48645 174 aa12.89□□□□□ -0.35
LMNA-205ENST00000368299 TCTAP57738 103 aa12.89□□□□□ -0.35
LMNA-205ENST00000368299 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
LMNA-205ENST00000368299 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
LMNA-205ENST00000368299 PRSS1P07477 247 aa12.88□□□□□ -0.35
LMNA-205ENST00000368299 CST9LQ9H4G1 147 aa12.88□□□□□ -0.35
LMNA-205ENST00000368299 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
LMNA-205ENST00000368299 PCP4P48539 62 aa12.88□□□□□ -0.35
LMNA-205ENST00000368299 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
LMNA-205ENST00000368299 HHLA3Q9XRX5 114 aa12.88□□□□□ -0.35
LMNA-205ENST00000368299 C9orf118A6NHY6 69 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 NDUFA7O95182 113 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 AGRNO00468 2067 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 JPT2Q9H910 190 aa12.87□□□□□ -0.35
LMNA-205ENST00000368299 SUMO4Q6EEV6 95 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 A0A087WWL8 130 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
LMNA-205ENST00000368299 F5H697 171 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
LMNA-205ENST00000368299 ACANP16112 2415 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 SORL1Q92673 2214 aa12.86□□□□□ -0.35
LMNA-205ENST00000368299 IGKCP01834 107 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1A1P0DJD3 496 aaKnown RBP12.85□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1CP0DJD4 496 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 RBMY1FQ15415 496 aaKnown RBP12.85□□□□□ -0.35
LMNA-205ENST00000368299 TOMM6Q96B49 74 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 CSTL1Q9H114 145 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 AKAP9Q99996 3911 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
LMNA-205ENST00000368299 ZNF876PQ49A33 203 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
LMNA-205ENST00000368299 IGKV2D-26A0A0A0MRZ7 120 aa12.84□□□□□ -0.35
LMNA-205ENST00000368299 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
LMNA-205ENST00000368299 UFSP1Q6NVU6 142 aa12.84□□□□□ -0.35
LMNA-205ENST00000368299 HIGD1BQ9P298 99 aa12.84□□□□□ -0.35
LMNA-205ENST00000368299 TRBV6-5A0A0K0K1A5 114 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 DPM2O94777 84 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 CRYGDP07320 174 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 FAM74A4Q5TZK3 123 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 GTF2H5Q6ZYL4 71 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.35
LMNA-205ENST00000368299 VCYO14598 125 aa12.83□□□□□ -0.36
LMNA-205ENST00000368299 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
LMNA-205ENST00000368299 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 PIK3CD-AS1Q5SR53 167 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 H3BUT2 72 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 INSP01308 110 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 ZNF56Q15929 161 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
LMNA-205ENST00000368299 KIR2DL4Q99706 377 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms