RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BAALC-AS2P0C853 105 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 LHBP01229 141 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 RFPL3SP0C7P2 107 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 SBSPONQ8IVN8 264 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 IL17DQ8TAD2 202 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 USP9XQ93008 2570 aaPredicted RBP2.91□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV5-10-1A0A0J9YXX1 117 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 F5H768 121 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 KLKP1Q107X0 134 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 GPR179Q6PRD1 2367 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 PATE3B3GLJ2 98 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 RNASE8Q8TDE3 154 aaKnown RBP2.91□□□□□ -1.94
SYNE1-207ENST00000367255 PMS2CLQ68D20 193 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 LOC110117498A0A087WWA1 95 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 FAM168AQ92567 244 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 RITA1Q96K30 269 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 TP53TG1Q9Y2A0 90 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.91□□□□□ -1.94
SYNE1-207ENST00000367255 BUB1B-PAK6H3BSN5 160 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 RBBP6Q7Z6E9 1792 aaKnown RBP2.91□□□□□ -1.94
SYNE1-207ENST00000367255 WFDC2Q14508 124 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV1OR15-1A0A075B7D0 117 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 PLXNA1Q9UIW2 1896 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 COL24A1Q17RW2 1714 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 CHD8Q9HCK8 2581 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 APOC4P55056 127 aa2.91□□□□□ -1.94
SYNE1-207ENST00000367255 A0A1B0GUL6 1792 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 IGLC6P0CF74 106 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 LY6EQ16553 131 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 ARRDC1-AS1Q9H2J1 176 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 CSPG4Q6UVK1 2322 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 PATJQ8NI35 1801 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 PMS2P5A8MQ11 134 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 RPL39P5Q59GN2 51 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 IGLV5-45A0A087WSX0 123 aa2.9□□□□□ -1.94
SYNE1-207ENST00000367255 CRIP2P52943 208 aaPredicted RBP2.9□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1D-13A0A0B4J2D9 117 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-13P0DP09 117 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 COL11A1P12107 1806 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-207ENST00000367255 DEFB131AP59861 70 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 NDPQ00604 133 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 POM121L12Q8N7R1 296 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 WT1P19544 449 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-207ENST00000367255 STRCP1A6NGW2 1772 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 EFNA2O43921 213 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 BEAN1Q3B7T3 259 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 FAM167A-AS1Q96KT0 104 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 SHANK3Q9BYB0 1731 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 DOCK11Q5JSL3 2073 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 TNCP24821 2201 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 CUL9Q8IWT3 2517 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 TMEM178BH3BS89 294 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 LYZL4Q96KX0 146 aa2.9□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-27A0A075B6S5 117 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 MYO7BQ6PIF6 2116 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 LINC01548A6NM66 108 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 DSCAML1Q8TD84 2053 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 PAX4O43316 350 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 CFHR3Q02985 330 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 ZNF236Q9UL36 1845 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-17P01599 117 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 IGF1P05019 195 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 CD164Q04900 197 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 NREPQ16612 68 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 LRRK2Q5S007 2527 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 ATP11AUNQ6ZP68 121 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 C14orf178Q8N769 122 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-207ENST00000367255 TRPM7Q96QT4 1865 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 NUP210LQ5VU65 1888 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 FANCMQ8IYD8 2048 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 UBE2E2Q96LR5 201 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 MIFP14174 115 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 LINC00158P58513 81 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 GGNQ86UU5 652 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 C17orf77Q96MU5 243 aa2.89□□□□□ -1.95
SYNE1-207ENST00000367255 CGB3P0DN86 165 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 CGB7P0DN87 165 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 GATA1P15976 413 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TRAV40A0A0B4J280 105 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TRGV3P03979 118 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 Q0VFX4 171 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TRGV2A0A075B6R0 118 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 PLAC8L1A1L4L8 177 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 CLPSP04118 112 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 PARP14Q460N5 1801 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 ZFAND3Q9H8U3 227 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 PTPN13Q12923 2485 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 IGLV11-55A0A075B6I3 123 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 SIPA1L3O60292 1781 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TEX22C9J3V5 150 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 A0A0G2JMZ2 1700 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 LRRC37A2A6NM11 1700 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 LRRC37AA6NMS7 1700 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TNS1Q9HBL0 1735 aaKnown RBP2.88□□□□□ -1.95
SYNE1-207ENST00000367255 DYNAPQ8N1N2 210 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 SONP18583 2426 aaKnown RBP2.88□□□□□ -1.95
SYNE1-207ENST00000367255 A0A1B0GUV1 79 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms