RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
CSNK1E-202ENST00000366216 STHQ8IWL8 128 aa8.16□□□□□ -1.1
CSNK1E-202ENST00000366216 GNRH2O43555 120 aa8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 RNASE3P12724 160 aaKnown RBP8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 SPANXN1Q5VSR9 72 aa8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 OR10AG1Q8NH19 301 aa8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 TP53TG3Q9ULZ0 132 aa8.15□□□□□ -1.1
CSNK1E-202ENST00000366216 TRGV11A0A075B6L2 103 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 IFITM10A6NMD0 228 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 NXPH4O95158 308 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 CD7P09564 240 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 S100A2P29034 98 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 SMIM15Q7Z3B0 74 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 C18orf32Q8TCD1 76 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 MSRB1Q9NZV6 116 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
CSNK1E-202ENST00000366216 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 FXYD7P58549 80 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 NUTF2P61970 127 aaKnown RBP8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 LGALS9CQ6DKI2 356 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 AMN1Q8IY45 258 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 C9orf85Q96MD7 179 aa8.13□□□□□ -1.11
CSNK1E-202ENST00000366216 PKD1P98161 4303 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 SERF1AO75920 110 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 INSP01308 110 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 PPBPP02775 128 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 RBMY1A1P0DJD3 496 aaKnown RBP8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 RBMY1CP0DJD4 496 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 RAB4AP20338 218 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 AKR1D1P51857 326 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 LINC00310P59036 64 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 SSTP61278 116 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 RNF185Q96GF1 192 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 HIST1H2BLQ99880 126 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 KLK5Q9Y337 293 aaPredicted RBP8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 HSPG2P98160 4391 aa8.12□□□□□ -1.11
CSNK1E-202ENST00000366216 NUPR1O60356 82 aa8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 PDZD11Q5EBL8 140 aa8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 MORN3Q6PF18 240 aaPredicted RBP8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 TIMM8BQ9Y5J9 83 aaPredicted RBP8.11□□□□□ -1.11
CSNK1E-202ENST00000366216 CBY3A6NI87 242 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 D6R8Y8 96 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 M0R381 172 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 FABP4P15090 132 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 EVI2AP22794 236 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 WFDC10AQ9H1F0 79 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
CSNK1E-202ENST00000366216 CKS2P33552 79 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 SYT8Q8NBV8 401 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 PTH2Q96A98 100 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 AP1S3Q96PC3 154 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 LINC01587Q99440 93 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
CSNK1E-202ENST00000366216 HERC1Q15751 4861 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 ZNF415Q09FC8 603 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 NIT1Q86X76 327 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 DEFB125Q8N687 156 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 POM121L12Q8N7R1 296 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 MRAP2Q96G30 205 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 URB1-AS1Q96HZ7 61 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 GSN-AS1Q9NRJ2 163 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
CSNK1E-202ENST00000366216 A0A0J9YWU9 116 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 SPRY2O43597 315 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 LINC00614P0C842 121 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 SMIM6P0DI80 62 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 OVOL2Q9BRP0 275 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
CSNK1E-202ENST00000366216 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 HSBP1O75506 76 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 NPYP01303 97 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 PMCHP20382 165 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 LINC00518Q8N0U6 118 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 C14orf178Q8N769 122 aaPredicted RBP8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 SPXQ9BT56 116 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 GOLT1BQ9Y3E0 138 aa8.06□□□□□ -1.12
CSNK1E-202ENST00000366216 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms