RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 EP400Q96L91 3159 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 FRYQ5TBA9 3013 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 GVQW2A0A096LPI5 108 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 TEX49A0A1B0GTD5 131 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 S100A6P06703 90 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 LINC00305Q7Z4B0 112 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 FAM24BQ8N5W8 94 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 TEX29Q8N6K0 151 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 DYDC1Q8WWB3 177 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 BET1LQ9NYM9 111 aa-1.22□□□□□ -2.6
RNU6-553P-201ENST00000364047 CRYBG3Q68DQ2 2970 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 TCOF1Q13428 1488 aaKnown RBP-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 TRAV12-2A0A075B6T6 113 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 TRBV10-1A0A0K0K1A3 114 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 TMEM210A6NLX4 147 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 KLK9Q2XQG4 91 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 MT1MQ8N339 61 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 MORN4Q8NDC4 146 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 FREM2Q5SZK8 3169 aa-1.23□□□□□ -2.61
RNU6-553P-201ENST00000364047 CEP290O15078 2479 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 TRAV13-1A0A0B4J241 112 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 ELOF1P60002 83 aaKnown RBP-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 Q5VSD8 79 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 OR51A4Q8NGJ6 313 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 SPG11Q96JI7 2443 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 PTPRQQ9UMZ3 2332 aa-1.24□□□□□ -2.61
RNU6-553P-201ENST00000364047 CFAP54Q96N23 3096 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 ADGBQ8N7X0 1667 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 APOC1P02654 83 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 MT1GP13640 62 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 S100A11P31949 105 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 POLR2JP52435 117 aaKnown RBP-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 STX19Q8N4C7 294 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 UFC1Q9Y3C8 167 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 DNAH10Q8IVF4 4471 aa-1.25□□□□□ -2.61
RNU6-553P-201ENST00000364047 URB1O60287 2271 aaKnown RBP-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 DLEC1Q9Y238 1755 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 MAP2P11137 1827 aaKnown RBP-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 VCANP13611 3396 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 H3BMG7 143 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 MT2AP02795 61 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 TCTAP57738 103 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 TAS2R41P59536 307 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 MT1XP80297 61 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 BASP1P80723 227 aaKnown RBP-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 DEFA5Q01523 94 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 SMIM11BQ8TCY0 68 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 LAMTOR2Q9Y2Q5 125 aa-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 TNS1Q9HBL0 1735 aaKnown RBP-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-553P-201ENST00000364047 C5orf42Q9H799 3197 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 IGHV1-24A0A0C4DH33 117 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 ZNF670-ZNF695F2Z2N8 137 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 CKS2P33552 79 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 SRP9P49458 86 aaKnown RBP-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 LSM3P62310 102 aaKnown RBP-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 TMED4Q7Z7H5 227 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 FAM135BQ49AJ0 1406 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 CADP27708 2225 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 PDE4DIPQ5VU43 2346 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 PRUNE2Q8WUY3 3088 aa-1.27□□□□□ -2.61
RNU6-553P-201ENST00000364047 ATMQ13315 3056 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 OR2H2O95918 312 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 IFNA21P01568 189 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 ADCYAP1P18509 176 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 CRYGSP22914 178 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 ASIPP42127 132 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 LXNQ9BS40 222 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 SPAG17Q6Q759 2223 aa-1.28□□□□□ -2.61
RNU6-553P-201ENST00000364047 CSPG4Q6UVK1 2322 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 MED13LQ71F56 2210 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 APODP05090 189 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 OR4S1Q8NGB4 309 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 OTOSQ8NHW6 89 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 VPS13CQ709C8 3753 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 LAMC1P11047 1609 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 USP34Q70CQ2 3546 aa-1.29□□□□□ -2.62
RNU6-553P-201ENST00000364047 TRAV17A0A0B4J275 112 aa-1.3□□□□□ -2.62
RNU6-553P-201ENST00000364047 MT1FP04733 61 aa-1.3□□□□□ -2.62
RNU6-553P-201ENST00000364047 PI4KAP42356 2102 aa-1.3□□□□□ -2.62
RNU6-553P-201ENST00000364047 HTTP42858 3142 aa-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 NINQ8N4C6 2090 aa-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 HBDP02042 147 aa-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 MT1HP80294 61 aa-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 CHMP6Q96FZ7 201 aa-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 SPTAN1Q13813 2472 aaKnown RBP-1.31□□□□□ -2.62
RNU6-553P-201ENST00000364047 PTPRGP23470 1445 aa-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 TRBV7-6A0A0J9YX20 115 aa-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 TFF1P04155 84 aa-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 CRYBA4P53673 196 aa-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 DCUN1D2Q6PH85 259 aa-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 SMG6Q86US8 1419 aaKnown RBP-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 YTHDC2Q9H6S0 1430 aaKnown RBP-1.32□□□□□ -2.62
RNU6-553P-201ENST00000364047 PCNTO95613 3336 aa-1.33□□□□□ -2.62
RNU6-553P-201ENST00000364047 RANBP2P49792 3224 aaKnown RBP-1.33□□□□□ -2.62
RNU6-553P-201ENST00000364047 TANC2Q9HCD6 1990 aa-1.33□□□□□ -2.62
RNU6-553P-201ENST00000364047 RBAKDNA6NC62 111 aa-1.33□□□□□ -2.62
RNU6-553P-201ENST00000364047 MT1EP04732 61 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms