RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SNX29P2Q8IUI4 249 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 SELENOHQ8IZQ5 122 aaKnown RBP3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 RNASEH2CQ8TDP1 164 aaKnown RBP3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 ACY3Q96HD9 319 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 C7orf50Q9BRJ6 194 aaKnown RBP3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 RTBDNQ9BSG5 229 aaPredicted RBP3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 DOK5Q9P104 306 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 A0A087WTM6 91 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 A0A0J9YY99 117 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 ZNF98A6NK75 572 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 ISLRO14498 428 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 CD3DP04234 171 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 TSPAN5P62079 268 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR2F1Q13607 317 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 UBE2NLQ5JXB2 153 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 C1orf194Q5T5A4 169 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 SPATA31B1PQ5VZV4 182 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR13C8Q8NGS7 320 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 YIPF6Q96EC8 236 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMEM222Q9H0R3 208 aa3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 NOP10Q9NPE3 64 aaKnown RBP3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 MRPS16Q9Y3D3 137 aaKnown RBP3.06□□□□□ -1.92
RNU4-39P-201ENST00000362455 A0A096LPF7 62 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 GSTZ1O43708 216 aaPredicted RBP3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 RLN2P04090 185 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR5AC1P0C628 307 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 M6PRP20645 277 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 RCVRNP35243 200 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 LSM3P62310 102 aaKnown RBP3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 SUPT4H1P63272 117 aaKnown RBP3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 PSG3Q16557 428 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 EBLN2Q6P2I7 272 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 FAM231DQ6ZW35 169 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR4C16Q8NGL9 310 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 TERB2Q8NHR7 220 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 GNPNAT1Q96EK6 184 aaPredicted RBP3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 LINC01587Q99440 93 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMEM208Q9BTX3 173 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 ENY2Q9NPA8 101 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 RPRMQ9NS64 109 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
RNU4-39P-201ENST00000362455 LRP2P98164 4655 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 CEBPZOSA8MTT3 80 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 SNRPGP15A8MWD9 76 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 HPGDSO60760 199 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 SEC11BP0C7V7 166 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 HTN1P15515 57 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 S100GP29377 79 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 NEDD8Q15843 81 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR8I2Q8N0Y5 310 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 TRGV9Q99603 122 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 PDCD10Q9BUL8 212 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 PARD6GQ9BYG4 376 aaPredicted RBP3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 TIMM8BQ9Y5J9 83 aaPredicted RBP3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 U3KQ87 197 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 PKHD1L1Q86WI1 4243 aa3.04□□□□□ -1.92
RNU4-39P-201ENST00000362455 LINC00854A0A1B0GVQ3 168 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 CRYM-AS1A6NIL9 109 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 H3BNG1 76 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 PITX3O75364 302 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 ATG12O94817 140 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 CXCL3P19876 107 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 B2MP61769 119 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 NCS1P62166 190 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 RNASE10Q5GAN6 216 aaKnown RBP3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 Q6ZTI0 123 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 LYZL2Q7Z4W2 148 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMEM144Q7Z5S9 345 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMED4Q7Z7H5 227 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 OR8A1Q8NGG7 326 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 DTD1Q8TEA8 209 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 NAA60Q9H7X0 242 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 COPZ2Q9P299 210 aa3.03□□□□□ -1.92
RNU4-39P-201ENST00000362455 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 H3BRN7 92 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 SULT1A3P0DMM9 295 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 SULT1A4P0DMN0 295 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 IAPPP10997 89 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 ORM2P19652 201 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 RBX1P62877 108 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 HIST1H1AQ02539 215 aaPredicted RBP3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 SCGB2B2Q4G0G5 96 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 FAM104BQ5XKR9 115 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 LYPD5Q6UWN5 251 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 PATE2Q6UY27 113 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 Q6ZQT7 251 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 TMEM229BQ8NBD8 167 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 RNASE11Q8TAA1 199 aaKnown RBP3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 TMEM263Q8WUH6 116 aaKnown RBP3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms