RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 MGPP08493 103 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 ANKRD29Q8N6D5 301 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 NRACQ8N912 160 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 C10orf105Q8TEF2 133 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 ZFAND6Q6FIF0 208 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 C10orf99Q6UWK7 81 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 C16orf92Q96LL3 132 aa12.23□□□□□ -0.45
IFT140-201ENST00000361339 PTPN13Q12923 2485 aa12.22□□□□□ -0.45
IFT140-201ENST00000361339 PIMREGQ9BSJ6 248 aa12.22□□□□□ -0.45
IFT140-201ENST00000361339 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.45
IFT140-201ENST00000361339 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 BEX4Q9NWD9 120 aaPredicted RBP12.21□□□□□ -0.45
IFT140-201ENST00000361339 U3KQE9 123 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 A8MWV9 139 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 PRB1P04280 392 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 PF4V1P10720 104 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 CRIP2P52943 208 aaPredicted RBP12.21□□□□□ -0.45
IFT140-201ENST00000361339 TEN1Q86WV5 123 aa12.21□□□□□ -0.45
IFT140-201ENST00000361339 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.46
IFT140-201ENST00000361339 SORL1Q92673 2214 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 KLK9Q2XQG4 91 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 LINC01559Q495D7 138 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.46
IFT140-201ENST00000361339 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.46
IFT140-201ENST00000361339 C3orf56Q8N813 242 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.46
IFT140-201ENST00000361339 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
IFT140-201ENST00000361339 IGHV7-4-1A0A0J9YVY3 117 aa12.2□□□□□ -0.46
IFT140-201ENST00000361339 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
IFT140-201ENST00000361339 A6NJY4 79 aa12.2□□□□□ -0.46
IFT140-201ENST00000361339 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
IFT140-201ENST00000361339 C9JAW5 83 aa12.19□□□□□ -0.46
IFT140-201ENST00000361339 GAGE5Q13069 117 aa12.19□□□□□ -0.46
IFT140-201ENST00000361339 GAGE6Q13070 117 aa12.19□□□□□ -0.46
IFT140-201ENST00000361339 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
IFT140-201ENST00000361339 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
IFT140-201ENST00000361339 RASL10AQ92737 203 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 CREBBPQ92793 2442 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 CRLF1O75462 422 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 SMIM20Q8N5G0 67 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 TLN2Q9Y4G6 2542 aa12.18□□□□□ -0.46
IFT140-201ENST00000361339 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
IFT140-201ENST00000361339 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
IFT140-201ENST00000361339 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
IFT140-201ENST00000361339 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
IFT140-201ENST00000361339 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
IFT140-201ENST00000361339 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
IFT140-201ENST00000361339 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
IFT140-201ENST00000361339 A6NDX4 124 aa12.16□□□□□ -0.46
IFT140-201ENST00000361339 DUSP14O95147 198 aaKnown RBP12.16□□□□□ -0.46
IFT140-201ENST00000361339 MSMBP08118 114 aa12.16□□□□□ -0.46
IFT140-201ENST00000361339 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
IFT140-201ENST00000361339 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
IFT140-201ENST00000361339 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 HERV-K104P63124 156 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 C9orf47Q6ZRZ4 202 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 CFC1P0CG37 223 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 SUMO2P61956 95 aaKnown RBP12.15□□□□□ -0.46
IFT140-201ENST00000361339 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 Q1RN00 199 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 GAGE2EQ4V326 116 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 GAGE2DQ9UEU5 116 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 NBPF19A0A087WUL8 3843 aa12.15□□□□□ -0.46
IFT140-201ENST00000361339 C11orf86A6NJI1 115 aa12.15□□□□□ -0.47
IFT140-201ENST00000361339 IGHG2P01859 326 aa12.15□□□□□ -0.47
IFT140-201ENST00000361339 UBE2D1P51668 147 aa12.15□□□□□ -0.47
IFT140-201ENST00000361339 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 ZFAND2AQ8N6M9 145 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 SLC25A20O43772 301 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 SNCGO76070 127 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 CD7P09564 240 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
IFT140-201ENST00000361339 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
IFT140-201ENST00000361339 SOCS3O14543 225 aa12.13□□□□□ -0.47
IFT140-201ENST00000361339 UBE2D3P61077 147 aa12.13□□□□□ -0.47
IFT140-201ENST00000361339 UBE2D2P62837 147 aa12.13□□□□□ -0.47
IFT140-201ENST00000361339 HIST2H2BDQ6DRA6 164 aa12.13□□□□□ -0.47
IFT140-201ENST00000361339 NTN5Q8WTR8 489 aaPredicted RBP12.13□□□□□ -0.47
IFT140-201ENST00000361339 GNRH2O43555 120 aa12.13□□□□□ -0.47
IFT140-201ENST00000361339 RPL39P62891 51 aaKnown RBP12.13□□□□□ -0.47
IFT140-201ENST00000361339 RNASE4P34096 147 aaKnown RBP12.12□□□□□ -0.47
IFT140-201ENST00000361339 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
IFT140-201ENST00000361339 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
IFT140-201ENST00000361339 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
IFT140-201ENST00000361339 ORMDL2Q53FV1 153 aa12.12□□□□□ -0.47
IFT140-201ENST00000361339 TOMM6Q96B49 74 aa12.12□□□□□ -0.47
IFT140-201ENST00000361339 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 A0A0J9YY99 117 aa12.11□□□□□ -0.47
IFT140-201ENST00000361339 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms