RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 BATFQ16520 125 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 COL5A1-AS1Q5SY13 56 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 MDFICQ9P1T7 246 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 HIVEP1P15822 2718 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 ACANP16112 2415 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 F8P00451 2351 aa13.51□□□□□ -0.25
PDLIM7-203ENST00000359895 COX8AP10176 69 aa13.51□□□□□ -0.25
PDLIM7-203ENST00000359895 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
PDLIM7-203ENST00000359895 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-203ENST00000359895 G0S2P27469 103 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 HILS1P60008 231 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 ODF1Q14990 250 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 CLUHP3Q96NS8 147 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 ZMAT4Q9H898 229 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 A0A1W2PRX2 142 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 CBY3A6NI87 242 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 LINC01549A6NIU2 74 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 SUMO4Q6EEV6 95 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 JPT2Q9H910 190 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
PDLIM7-203ENST00000359895 F5H697 171 aa13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 NDUFA7O95182 113 aa13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 TOMM6Q96B49 74 aa13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 JMJD8Q96S16 334 aa13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 ZNF256Q9Y2P7 627 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-203ENST00000359895 A0A087WWL8 130 aa13.47□□□□□ -0.25
PDLIM7-203ENST00000359895 ANKRD39Q53RE8 183 aa13.47□□□□□ -0.25
PDLIM7-203ENST00000359895 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
PDLIM7-203ENST00000359895 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-203ENST00000359895 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 IGKCP01834 107 aa13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 LINC00467Q9BRT7 94 aa13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 SORL1Q92673 2214 aa13.46□□□□□ -0.25
PDLIM7-203ENST00000359895 VCYO14598 125 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 DPM2O94777 84 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 CRYGDP07320 174 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 HINT1P49773 126 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 POLR2KP53803 58 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 TLN2Q9Y4G6 2542 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 TRAV12-1A0A0B4J245 112 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 CMC4P56277 68 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 ZNF124Q15973 351 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 ZNF876PQ49A33 203 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 PIK3CD-AS1Q5SR53 167 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 STPG4Q8N801 248 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 SCGB3A1Q96QR1 104 aa13.45□□□□□ -0.26
PDLIM7-203ENST00000359895 A0A087WX48 190 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 DLEU1O43261 78 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 ZNF56Q15929 161 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 FAM74A4Q5TZK3 123 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 C12orf54Q6X4T0 127 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 PTH2Q96A98 100 aa13.44□□□□□ -0.26
PDLIM7-203ENST00000359895 INSP01308 110 aa13.43□□□□□ -0.26
PDLIM7-203ENST00000359895 C2orf66Q6UXQ4 117 aa13.43□□□□□ -0.26
PDLIM7-203ENST00000359895 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
PDLIM7-203ENST00000359895 SMR3AQ99954 134 aa13.43□□□□□ -0.26
PDLIM7-203ENST00000359895 SONP18583 2426 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-203ENST00000359895 FGF6P10767 208 aa13.42□□□□□ -0.26
PDLIM7-203ENST00000359895 ODF3L2Q3SX64 289 aa13.42□□□□□ -0.26
PDLIM7-203ENST00000359895 TRPT1Q86TN4 253 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-203ENST00000359895 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
PDLIM7-203ENST00000359895 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 M0QY20 66 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 SIVA1O15304 175 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 PLNP26678 52 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 ERASQ7Z444 233 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 TP73-AS1Q9UF72 201 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 HHLA3Q9XRX5 114 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 SDHAF1A6NFY7 115 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 OR11H12B2RN74 326 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 H7C1H1 209 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 STHQ8IWL8 128 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 EDA2RQ9HAV5 297 aa13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 MRPL35Q9NZE8 188 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-203ENST00000359895 M0R2P5 195 aa13.4□□□□□ -0.26
PDLIM7-203ENST00000359895 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
PDLIM7-203ENST00000359895 ZFP2Q6ZN57 461 aa13.4□□□□□ -0.26
PDLIM7-203ENST00000359895 C2orf91Q6ZV80 131 aa13.4□□□□□ -0.26
PDLIM7-203ENST00000359895 LINC01587Q99440 93 aa13.4□□□□□ -0.26
PDLIM7-203ENST00000359895 A8MWV9 139 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 F8VRH5 84 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 HTN1P15515 57 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 PROK1P58294 105 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 NEXN-AS1Q8NBZ9 246 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 SPXQ9BT56 116 aa13.39□□□□□ -0.27
PDLIM7-203ENST00000359895 NMUP48645 174 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms