RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 UBE2D3P61077 147 aa10.05□□□□□ -0.8
IFT20-202ENST00000357896 UBE2D2P62837 147 aa10.05□□□□□ -0.8
IFT20-202ENST00000357896 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
IFT20-202ENST00000357896 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
IFT20-202ENST00000357896 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
IFT20-202ENST00000357896 PLA2G10O15496 165 aa10.04□□□□□ -0.8
IFT20-202ENST00000357896 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
IFT20-202ENST00000357896 A0A087WWL8 130 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
IFT20-202ENST00000357896 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 A6NHS1 94 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 PHOX2AO14813 284 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 H2AFB2P0C5Z0 115 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
IFT20-202ENST00000357896 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
IFT20-202ENST00000357896 H3BVH4 76 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 ODF1Q14990 250 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 LRRC37A5PQ49AS3 106 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 WDR73Q6P4I2 378 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 SPACA4Q8TDM5 124 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
IFT20-202ENST00000357896 hDV102S1A0JD36 115 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 B4DEV8 164 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 H0YIZ8 118 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 KRTAP10-8P60410 259 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 DNLZQ5SXM8 178 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 BATF3Q9NR55 127 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 NDUFA13Q9P0J0 144 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 EPDR1Q9UM22 224 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 PHLDA3Q9Y5J5 127 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
IFT20-202ENST00000357896 HMGB3O15347 200 aaKnown RBP10□□□□□ -0.81
IFT20-202ENST00000357896 PTTG1O95997 202 aa10□□□□□ -0.81
IFT20-202ENST00000357896 CHTF8P0CG12 524 aa10□□□□□ -0.81
IFT20-202ENST00000357896 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
IFT20-202ENST00000357896 CYCSP99999 105 aaKnown RBP10□□□□□ -0.81
IFT20-202ENST00000357896 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
IFT20-202ENST00000357896 REG3GQ6UW15 175 aa10□□□□□ -0.81
IFT20-202ENST00000357896 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
IFT20-202ENST00000357896 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
IFT20-202ENST00000357896 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
IFT20-202ENST00000357896 HSPB11Q9Y547 144 aa9.99□□□□□ -0.81
IFT20-202ENST00000357896 SIX6O95475 246 aa9.98□□□□□ -0.81
IFT20-202ENST00000357896 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
IFT20-202ENST00000357896 RAB2AP61019 212 aa9.98□□□□□ -0.81
IFT20-202ENST00000357896 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
IFT20-202ENST00000357896 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
IFT20-202ENST00000357896 KRBOX1C9JBD0 128 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 M0R381 172 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 RAB4BP61018 213 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 RBX1P62877 108 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
IFT20-202ENST00000357896 CLPSL2Q6UWE3 100 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 SPINK6Q6UWN8 80 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
IFT20-202ENST00000357896 FAM240BA0A1B0GVZ2 78 aa9.96□□□□□ -0.82
IFT20-202ENST00000357896 STAG3L2P0CL84 134 aa9.96□□□□□ -0.82
IFT20-202ENST00000357896 STAG3L3P0CL85 134 aa9.96□□□□□ -0.82
IFT20-202ENST00000357896 CDC34P49427 236 aaPredicted RBP9.96□□□□□ -0.82
IFT20-202ENST00000357896 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
IFT20-202ENST00000357896 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 GRIFINA4D1Z8 144 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 M0R036 132 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 P01737 135 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 GCHFRP30047 84 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
IFT20-202ENST00000357896 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 TMEM167BQ9NRX6 74 aa9.95□□□□□ -0.82
IFT20-202ENST00000357896 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 SLPIP03973 132 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 PET100P0DJ07 73 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 GZMBP10144 247 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 REG3AQ06141 175 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 PPP1R1CQ8WVI7 109 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 KRTAP9-2Q9BYQ4 174 aa9.94□□□□□ -0.82
IFT20-202ENST00000357896 TRAV34A0A0B4J273 112 aa9.93□□□□□ -0.82
IFT20-202ENST00000357896 GAGE6Q13070 117 aa9.93□□□□□ -0.82
IFT20-202ENST00000357896 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
IFT20-202ENST00000357896 TRBV25-1A0A075B6N4 114 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 CXorf1O96002 111 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 CRIP1P50238 77 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 ZNF56Q15929 161 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 FAM162BQ5T6X4 162 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
IFT20-202ENST00000357896 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 SH2D1AO60880 128 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 MPC2O95563 127 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 IFNA7P01567 189 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 COX6A2Q02221 97 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 MZT2BQ6NZ67 158 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 NTM-AS1Q6ZSK4 140 aa9.91□□□□□ -0.82
IFT20-202ENST00000357896 DERL1Q9BUN8 251 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 327.5 ms