RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 EVI2AP22794 236 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 AKR1C3P42330 323 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 UBE2G1P62253 170 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.61
PDLIM7-201ENST00000355572 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
PDLIM7-201ENST00000355572 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
PDLIM7-201ENST00000355572 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
PDLIM7-201ENST00000355572 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
PDLIM7-201ENST00000355572 ATP6V0E2Q8NHE4 81 aa11.2□□□□□ -0.62
PDLIM7-201ENST00000355572 A0A087WWL8 130 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 RAB19A4D1S5 217 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 A8MWV9 139 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 CIDEAO60543 219 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 LELP1Q5T871 98 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 UQCC3Q6UW78 93 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 ZFP2Q6ZN57 461 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 SH2D6Q7Z4S9 175 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
PDLIM7-201ENST00000355572 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 XGP55808 180 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 WFDC2Q14508 124 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 PIK3CD-AS1Q5SR53 167 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 NFE4Q86UQ8 179 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 Q8N1X5 172 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 Q9HAA7 133 aa11.18□□□□□ -0.62
PDLIM7-201ENST00000355572 M0R381 172 aa11.17□□□□□ -0.62
PDLIM7-201ENST00000355572 FAM74A4Q5TZK3 123 aa11.17□□□□□ -0.62
PDLIM7-201ENST00000355572 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
PDLIM7-201ENST00000355572 SFRP2Q96HF1 295 aa11.17□□□□□ -0.62
PDLIM7-201ENST00000355572 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
PDLIM7-201ENST00000355572 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
PDLIM7-201ENST00000355572 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
PDLIM7-201ENST00000355572 TEX46H3BTG2 121 aa11.16□□□□□ -0.62
PDLIM7-201ENST00000355572 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
PDLIM7-201ENST00000355572 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
PDLIM7-201ENST00000355572 TRAV8-6A0A0B4J262 113 aa11.15□□□□□ -0.62
PDLIM7-201ENST00000355572 K7EP13 123 aa11.15□□□□□ -0.62
PDLIM7-201ENST00000355572 HAMPP81172 84 aa11.15□□□□□ -0.62
PDLIM7-201ENST00000355572 TOR2AQ5JU69 321 aa11.15□□□□□ -0.62
PDLIM7-201ENST00000355572 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
PDLIM7-201ENST00000355572 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-201ENST00000355572 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
PDLIM7-201ENST00000355572 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
PDLIM7-201ENST00000355572 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
PDLIM7-201ENST00000355572 PHLDA3Q9Y5J5 127 aa11.14□□□□□ -0.63
PDLIM7-201ENST00000355572 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
PDLIM7-201ENST00000355572 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
PDLIM7-201ENST00000355572 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
PDLIM7-201ENST00000355572 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
PDLIM7-201ENST00000355572 PRR27Q6MZM9 219 aa11.12□□□□□ -0.63
PDLIM7-201ENST00000355572 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
PDLIM7-201ENST00000355572 RHODO00212 210 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 EREGO14944 169 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 SNAI2O43623 268 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 ZFP82Q8N141 532 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 SSBP4Q9BWG4 385 aaPredicted RBP11.11□□□□□ -0.63
PDLIM7-201ENST00000355572 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
PDLIM7-201ENST00000355572 GZMBP10144 247 aa11.1□□□□□ -0.63
PDLIM7-201ENST00000355572 SSTP61278 116 aa11.1□□□□□ -0.63
PDLIM7-201ENST00000355572 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
PDLIM7-201ENST00000355572 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 UBE2D3P61077 147 aa11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 UBE2D2P62837 147 aa11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 NIT1Q86X76 327 aa11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 DNAH8Q96JB1 4490 aa11.09□□□□□ -0.63
PDLIM7-201ENST00000355572 FAT1Q14517 4588 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 RBFOX3A6NFN3 312 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 LECT2O14960 151 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 PSCAO43653 123 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 CXCL1P09341 107 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 CENPWQ5EE01 88 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 Q8N814 137 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 FAM30AQ9NZY2 134 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
PDLIM7-201ENST00000355572 GCSHP23434 173 aa11.07□□□□□ -0.64
PDLIM7-201ENST00000355572 LAGE3Q14657 143 aa11.07□□□□□ -0.64
PDLIM7-201ENST00000355572 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
PDLIM7-201ENST00000355572 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
PDLIM7-201ENST00000355572 NDUFS6O75380 124 aaKnown RBP11.06□□□□□ -0.64
PDLIM7-201ENST00000355572 OR5AL1P0C617 328 aa11.06□□□□□ -0.64
PDLIM7-201ENST00000355572 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 PEA15Q15121 130 aa11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 ZNF56Q15929 161 aa11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
PDLIM7-201ENST00000355572 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms