RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
PTPN11-201ENST00000351677 MED12LQ86YW9 2145 aa12.3□□□□□ -0.44
PTPN11-201ENST00000351677 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
PTPN11-201ENST00000351677 TINCRA0A1B0GVN0 87 aa12.3□□□□□ -0.44
PTPN11-201ENST00000351677 CTRLP40313 264 aa12.3□□□□□ -0.44
PTPN11-201ENST00000351677 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
PTPN11-201ENST00000351677 SLC25A29Q8N8R3 303 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 PRR14LQ5THK1 2151 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 K7EQD1 137 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 IGHG2P01859 326 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 FBXL19-AS1Q494R0 122 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 LINC00322Q6ZN03 302 aaPredicted RBP12.29□□□□□ -0.44
PTPN11-201ENST00000351677 NUP210LQ5VU65 1888 aa12.29□□□□□ -0.44
PTPN11-201ENST00000351677 IGLL5B9A064 214 aa12.28□□□□□ -0.44
PTPN11-201ENST00000351677 HAMPP81172 84 aa12.28□□□□□ -0.44
PTPN11-201ENST00000351677 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
PTPN11-201ENST00000351677 C9orf153Q5TBE3 101 aa12.28□□□□□ -0.44
PTPN11-201ENST00000351677 BAALCQ8WXS3 180 aa12.28□□□□□ -0.44
PTPN11-201ENST00000351677 GYPEP15421 78 aa12.27□□□□□ -0.44
PTPN11-201ENST00000351677 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.44
PTPN11-201ENST00000351677 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.44
PTPN11-201ENST00000351677 FXYD2P54710 66 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 K7EMT4 169 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 TMEM126AQ9H061 195 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 ESM1Q9NQ30 184 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 IGLV2-8P01709 118 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 UBL5Q9BZL1 73 aa12.27□□□□□ -0.45
PTPN11-201ENST00000351677 TNRC6AQ8NDV7 1962 aaKnown RBP12.26□□□□□ -0.45
PTPN11-201ENST00000351677 GPHB5Q86YW7 130 aa12.26□□□□□ -0.45
PTPN11-201ENST00000351677 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
PTPN11-201ENST00000351677 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
PTPN11-201ENST00000351677 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
PTPN11-201ENST00000351677 RNF152Q8N8N0 203 aa12.26□□□□□ -0.45
PTPN11-201ENST00000351677 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
PTPN11-201ENST00000351677 EIF4EBP1Q13541 118 aaPredicted RBP12.26□□□□□ -0.45
PTPN11-201ENST00000351677 ANKHD1Q8IWZ3 2542 aaKnown RBP12.26□□□□□ -0.45
PTPN11-201ENST00000351677 IGKV2D-24A0A075B6R9 120 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 TRBV6-1A0A0K0K1D8 114 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 A4D1N5 150 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 RS1O15537 224 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 PIFOQ8TCI5 191 aa12.25□□□□□ -0.45
PTPN11-201ENST00000351677 DAND5Q8N907 189 aa12.24□□□□□ -0.45
PTPN11-201ENST00000351677 LOXL1Q08397 574 aaPredicted RBP12.24□□□□□ -0.45
PTPN11-201ENST00000351677 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
PTPN11-201ENST00000351677 PRSS47A8MTI9 375 aa12.24□□□□□ -0.45
PTPN11-201ENST00000351677 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
PTPN11-201ENST00000351677 Q9HAA7 133 aa12.24□□□□□ -0.45
PTPN11-201ENST00000351677 A6NDX4 124 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 ODF3BA8MYP8 253 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 BAALC-AS2P0C853 105 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 IFITM1P13164 125 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 HERV-K104P63124 156 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
PTPN11-201ENST00000351677 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
PTPN11-201ENST00000351677 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
PTPN11-201ENST00000351677 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
PTPN11-201ENST00000351677 LMO4P61968 165 aa12.22□□□□□ -0.45
PTPN11-201ENST00000351677 ODF1Q14990 250 aa12.22□□□□□ -0.45
PTPN11-201ENST00000351677 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
PTPN11-201ENST00000351677 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
PTPN11-201ENST00000351677 IGHG4P01861 327 aa12.22□□□□□ -0.45
PTPN11-201ENST00000351677 C11orf86A6NJI1 115 aa12.21□□□□□ -0.46
PTPN11-201ENST00000351677 MED14OSP0DP75 135 aa12.21□□□□□ -0.46
PTPN11-201ENST00000351677 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.46
PTPN11-201ENST00000351677 ACACBO00763 2458 aa12.21□□□□□ -0.46
PTPN11-201ENST00000351677 TAX1BP3O14907 124 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 A0A0J9YX75 114 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 RMI2Q96E14 147 aa12.2□□□□□ -0.46
PTPN11-201ENST00000351677 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
PTPN11-201ENST00000351677 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
PTPN11-201ENST00000351677 CRYBA4P53673 196 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 C4orf3Q8WVX3 66 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 E9PLD3 99 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 IGHV3-30P01768 117 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 IGHV3-33P01772 117 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 IGHV3-30-3P0DP02 117 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 IGHV3-30-5P0DP03 117 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 DEFB4AO15263 64 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 CITED2Q99967 270 aaPredicted RBP12.19□□□□□ -0.46
PTPN11-201ENST00000351677 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
PTPN11-201ENST00000351677 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 TNCP24821 2201 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 RPL32P62910 135 aaKnown RBP12.18□□□□□ -0.46
PTPN11-201ENST00000351677 DEFB105AQ8NG35 78 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms