RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TRAV12-3A0A0B4J271 114 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 IGKV3-20P01619 116 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 MGPP08493 103 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 PLNP26678 52 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 K7EQG2 157 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 ELANEP08246 267 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 HOXD3P31249 432 aaPredicted RBP14.99□□□□□ -0.01
SPG7-202ENST00000341316 SAMD13Q5VXD3 122 aa14.99□□□□□ -0.01
SPG7-202ENST00000341316 PRRC2AP48634 2157 aaKnown RBP14.98□□□□□ -0.01
SPG7-202ENST00000341316 SUMO2P61956 95 aaKnown RBP14.98□□□□□ -0.01
SPG7-202ENST00000341316 C18orf65Q6ZTR6 163 aa14.98□□□□□ -0.01
SPG7-202ENST00000341316 MUC4Q99102 2169 aa14.98□□□□□ -0.01
SPG7-202ENST00000341316 A0A0J9YX75 114 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 NXPH4O95158 308 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 FAM159AQ6UWV7 190 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 Q96MF0 132 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 TENM4Q6N022 2769 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 CCDC168Q8NDH2 2452 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 TRAV12-2A0A075B6T6 113 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 F8VRH5 84 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 H7C1H1 209 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 UBE2E2Q96LR5 201 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 JPT2Q9H910 190 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 KIF25-AS1Q9Y6Z4 181 aa14.97□□□□□ -0.01
SPG7-202ENST00000341316 ITPR3Q14573 2671 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 TRAV12-1A0A0B4J245 112 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 LINC00315P59091 139 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 KRTAP1-3Q8IUG1 177 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 LGALS9O00182 355 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 SCGB3A1Q96QR1 104 aa14.96□□□□□ -0.01
SPG7-202ENST00000341316 AKAP9Q99996 3911 aa14.96□□□□□ -0.02
SPG7-202ENST00000341316 IGLL5B9A064 214 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 TAL2Q16559 108 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 ORMDL2Q53FV1 153 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 RNF152Q8N8N0 203 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 CHTOPQ9Y3Y2 248 aaKnown RBP14.95□□□□□ -0.02
SPG7-202ENST00000341316 E9PLD3 99 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 CD7P09564 240 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 SNRPD3P62318 126 aaKnown RBP14.95□□□□□ -0.02
SPG7-202ENST00000341316 DEFB136Q30KP8 78 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 TOMM6Q96B49 74 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 HIST1H4GQ99525 98 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 C20orf78Q9BR46 151 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 CUBNO60494 3623 aa14.95□□□□□ -0.02
SPG7-202ENST00000341316 RPL24P83731 157 aaKnown RBP14.94□□□□□ -0.02
SPG7-202ENST00000341316 POM121L12Q8N7R1 296 aa14.94□□□□□ -0.02
SPG7-202ENST00000341316 CHD6Q8TD26 2715 aa14.94□□□□□ -0.02
SPG7-202ENST00000341316 C12orf74Q32Q52 190 aa14.94□□□□□ -0.02
SPG7-202ENST00000341316 LRRC75A-AS1Q8N1F1 130 aa14.94□□□□□ -0.02
SPG7-202ENST00000341316 NEXN-AS1Q8NBZ9 246 aa14.93□□□□□ -0.02
SPG7-202ENST00000341316 TEX48A0A1B0GUV7 120 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 SLURP1P55000 103 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 ZNF479Q96JC4 524 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 ODF3Q96PU9 254 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 TRBV7-3A0A075B6L6 115 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 OR11H12B2RN74 326 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 SPINK13Q1W4C9 94 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 HIST2H2BDQ6DRA6 164 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 OR11H1Q8NG94 326 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 OR11H2Q8NH07 326 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 MDFICQ9P1T7 246 aa14.92□□□□□ -0.02
SPG7-202ENST00000341316 HIST2H2BCQ6DN03 193 aa14.91□□□□□ -0.02
SPG7-202ENST00000341316 A0A087WWL8 130 aa14.91□□□□□ -0.02
SPG7-202ENST00000341316 MYMXA0A1B0GTQ4 84 aa14.91□□□□□ -0.02
SPG7-202ENST00000341316 TCTEX1D4Q5JR98 221 aa14.91□□□□□ -0.02
SPG7-202ENST00000341316 C2orf66Q6UXQ4 117 aa14.91□□□□□ -0.02
SPG7-202ENST00000341316 IGHV3-16A0A0C4DH30 117 aa14.9□□□□□ -0.02
SPG7-202ENST00000341316 FOXI2Q6ZQN5 318 aa14.9□□□□□ -0.02
SPG7-202ENST00000341316 Q8N2B8 174 aa14.9□□□□□ -0.02
SPG7-202ENST00000341316 BAALCQ8WXS3 180 aa14.9□□□□□ -0.02
SPG7-202ENST00000341316 NF1P21359 2839 aa14.9□□□□□ -0.02
SPG7-202ENST00000341316 Q8N1Y9 231 aa14.89□□□□□ -0.03
SPG7-202ENST00000341316 C9orf85Q96MD7 179 aa14.89□□□□□ -0.03
SPG7-202ENST00000341316 DUX3Q96PT4 197 aa14.89□□□□□ -0.03
SPG7-202ENST00000341316 DEFB104AQ8WTQ1 72 aa14.89□□□□□ -0.03
SPG7-202ENST00000341316 FLNAP21333 2647 aaKnown RBP14.88□□□□□ -0.03
SPG7-202ENST00000341316 SUMO4Q6EEV6 95 aa14.88□□□□□ -0.03
SPG7-202ENST00000341316 AMTNQ6UX39 209 aa14.88□□□□□ -0.03
SPG7-202ENST00000341316 PRSS29PA6NIE9 313 aa14.87□□□□□ -0.03
SPG7-202ENST00000341316 LINC01619G3V211 115 aa14.87□□□□□ -0.03
SPG7-202ENST00000341316 WFDC2Q14508 124 aa14.87□□□□□ -0.03
SPG7-202ENST00000341316 H3BMG7 143 aa14.86□□□□□ -0.03
SPG7-202ENST00000341316 RRN3P1Q2M238 152 aa14.86□□□□□ -0.03
SPG7-202ENST00000341316 CYSLTR1Q9Y271 337 aa14.86□□□□□ -0.03
SPG7-202ENST00000341316 PRADC1Q9BSG0 188 aa14.86□□□□□ -0.03
SPG7-202ENST00000341316 IGHV1OR15-1A0A075B7D0 117 aa14.85□□□□□ -0.03
SPG7-202ENST00000341316 KNCNA6PVL3 124 aa14.85□□□□□ -0.03
SPG7-202ENST00000341316 A0A1B0GWB2 263 aa14.85□□□□□ -0.03
SPG7-202ENST00000341316 F8W1H4 67 aa14.85□□□□□ -0.03
SPG7-202ENST00000341316 PPP1R17O96001 155 aa14.85□□□□□ -0.03
SPG7-202ENST00000341316 TMEM238C9JI98 176 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 F5H697 171 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 RBMY1A1P0DJD3 496 aaKnown RBP14.84□□□□□ -0.03
SPG7-202ENST00000341316 RBMY1CP0DJD4 496 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 RBMY1FQ15415 496 aaKnown RBP14.84□□□□□ -0.03
SPG7-202ENST00000341316 FAM74A4Q5TZK3 123 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 WFDC11Q8NEX6 87 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 SPANXB1Q9NS25 103 aaPredicted RBP14.84□□□□□ -0.03
SPG7-202ENST00000341316 ACANP16112 2415 aa14.84□□□□□ -0.03
SPG7-202ENST00000341316 DUSP14O95147 198 aaKnown RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms