RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SLC25A16P16260 332 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 ARHGAP32A7KAX9 2087 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 COX7A1P24310 79 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 DTX2Q86UW9 622 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 KLHL30-AS1Q8NEE0 82 aa9.07□□□□□ -0.96
RTN3-203ENST00000341307 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 A0A0J9YY99 117 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 SH2D1AO60880 128 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 WT1-ASQ06250 92 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 C10orf55Q5SWW7 151 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 Q5XG85 94 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 PRR25Q96S07 402 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 TPSG1Q9NRR2 321 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
RTN3-203ENST00000341307 ERHP84090 104 aaKnown RBP9.06□□□□□ -0.96
RTN3-203ENST00000341307 C11orf71Q6IPW1 123 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 Q6ZS46 218 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
RTN3-203ENST00000341307 TRBV10-2A0A0K0K1G8 114 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 LINC00527Q9UJ94 153 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 P0DMU3 169 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
RTN3-203ENST00000341307 LAGE3Q14657 143 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 GAGE2AQ6NT46 116 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 DUX3Q96PT4 197 aa9.05□□□□□ -0.96
RTN3-203ENST00000341307 CNTFRP26992 372 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 OVOL1O14753 267 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 APELAP0DMC3 54 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 DPH3Q96FX2 82 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
RTN3-203ENST00000341307 CYSRT1A8MQ03 144 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
RTN3-203ENST00000341307 CRYGAP11844 174 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 PLXNB1O43157 2135 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 IGLV1-47P01700 117 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 COX7CP15954 63 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 TEX15Q9BXT5 2789 aa9.03□□□□□ -0.96
RTN3-203ENST00000341307 C8orf31Q8N9H6 132 aa9.02□□□□□ -0.96
RTN3-203ENST00000341307 BUB1B-PAK6H3BSN5 160 aa9.02□□□□□ -0.97
RTN3-203ENST00000341307 M0R3E3 92 aa9.02□□□□□ -0.97
RTN3-203ENST00000341307 DEFB121Q5J5C9 76 aa9.02□□□□□ -0.97
RTN3-203ENST00000341307 TMEM263Q8WUH6 116 aaKnown RBP9.02□□□□□ -0.97
RTN3-203ENST00000341307 TRBV19A0A075B6N1 114 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 H7C2G1 150 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 MRGPRG-AS1Q2M3A8 158 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 PIMREGQ9BSJ6 248 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 IGHV1-3A0A0C4DH29 117 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 CRYGDP07320 174 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 C2orf82Q6UX34 121 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 TMEM167AQ8TBQ9 72 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 CFHR4Q92496 578 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
RTN3-203ENST00000341307 hADV29S1A0JD25 119 aa9□□□□□ -0.97
RTN3-203ENST00000341307 CRYGBP07316 175 aa9□□□□□ -0.97
RTN3-203ENST00000341307 SUB1P53999 127 aaKnown RBP eCLIP9□□□□□ -0.974e-7■■□□□ 11.5
RTN3-203ENST00000341307 SLC25A29Q8N8R3 303 aa9□□□□□ -0.97
RTN3-203ENST00000341307 NRACQ8N912 160 aa9□□□□□ -0.97
RTN3-203ENST00000341307 LINC00477Q96M19 166 aa9□□□□□ -0.97
RTN3-203ENST00000341307 H7C423 109 aa9□□□□□ -0.97
RTN3-203ENST00000341307 J3QLI3 93 aa9□□□□□ -0.97
RTN3-203ENST00000341307 KRTAP10-9P60411 292 aa9□□□□□ -0.97
RTN3-203ENST00000341307 SRSF2Q01130 221 aaKnown RBP9□□□□□ -0.97
RTN3-203ENST00000341307 IGHV3-21A0A0B4J1V1 117 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 ZNF80P51504 273 aaPredicted RBP8.99□□□□□ -0.97
RTN3-203ENST00000341307 HERVK_113P61574 105 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 LYZP61626 148 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 LY6G5BQ8NDX9 201 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 VMA21Q3ZAQ7 101 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 TMEM190Q8WZ59 177 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 METTL26Q96S19 204 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 PDZD2O15018 2839 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 ZFHX3Q15911 3703 aa8.99□□□□□ -0.97
RTN3-203ENST00000341307 ORM1P02763 201 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 ZFP36P26651 326 aaKnown RBP8.98□□□□□ -0.97
RTN3-203ENST00000341307 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 HCP5Q6MZN7 132 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
RTN3-203ENST00000341307 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 TRAV26-2A0A0B4J265 109 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms