RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
BRCC3-202ENST00000340647 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
BRCC3-202ENST00000340647 AKR1C3P42330 323 aa11.38□□□□□ -0.59
BRCC3-202ENST00000340647 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
BRCC3-202ENST00000340647 A0A087WWL8 130 aa11.37□□□□□ -0.59
BRCC3-202ENST00000340647 KANTRA0A1W2PQU2 76 aa11.37□□□□□ -0.59
BRCC3-202ENST00000340647 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
BRCC3-202ENST00000340647 H2AFB1P0C5Y9 115 aa11.36□□□□□ -0.59
BRCC3-202ENST00000340647 CDPF1Q6NVV7 123 aa11.36□□□□□ -0.59
BRCC3-202ENST00000340647 VPS13BQ7Z7G8 4022 aa11.35□□□□□ -0.59
BRCC3-202ENST00000340647 WFDC2Q14508 124 aa11.35□□□□□ -0.59
BRCC3-202ENST00000340647 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
BRCC3-202ENST00000340647 PHLDA3Q9Y5J5 127 aa11.35□□□□□ -0.59
BRCC3-202ENST00000340647 M0R381 172 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 SSBP4Q9BWG4 385 aaPredicted RBP11.34□□□□□ -0.59
BRCC3-202ENST00000340647 Q9HAA7 133 aa11.34□□□□□ -0.59
BRCC3-202ENST00000340647 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
BRCC3-202ENST00000340647 EREGO14944 169 aa11.33□□□□□ -0.6
BRCC3-202ENST00000340647 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
BRCC3-202ENST00000340647 DAZ4Q86SG3 579 aaKnown RBP11.33□□□□□ -0.6
BRCC3-202ENST00000340647 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
BRCC3-202ENST00000340647 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
BRCC3-202ENST00000340647 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
BRCC3-202ENST00000340647 DAZ3Q9NR90 486 aaKnown RBP11.33□□□□□ -0.6
BRCC3-202ENST00000340647 RHODO00212 210 aa11.32□□□□□ -0.6
BRCC3-202ENST00000340647 SNAI2O43623 268 aa11.32□□□□□ -0.6
BRCC3-202ENST00000340647 S100A9P06702 114 aaKnown RBP11.32□□□□□ -0.6
BRCC3-202ENST00000340647 CXCL1P09341 107 aa11.32□□□□□ -0.6
BRCC3-202ENST00000340647 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
BRCC3-202ENST00000340647 RPL35P42766 123 aaKnown RBP11.31□□□□□ -0.6
BRCC3-202ENST00000340647 LAGE3Q14657 143 aa11.31□□□□□ -0.6
BRCC3-202ENST00000340647 TCTE3Q8IZS6 198 aa11.31□□□□□ -0.6
BRCC3-202ENST00000340647 MUC21A0A0G2JKD1 596 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 MUC21A0A140T8X8 626 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 PFDN1O60925 122 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 SULT1A2P50226 295 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 UBE2D3P61077 147 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 UBE2D2P62837 147 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 Q8N814 137 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 GNG13Q9P2W3 67 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
BRCC3-202ENST00000340647 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 GCSHP23434 173 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 EIF5AP63241 154 aaKnown RBP11.29□□□□□ -0.6
BRCC3-202ENST00000340647 Q6ZNX1 250 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 NIT1Q86X76 327 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
BRCC3-202ENST00000340647 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
BRCC3-202ENST00000340647 TRBV10-1A0A0K0K1A3 114 aa11.28□□□□□ -0.6
BRCC3-202ENST00000340647 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
BRCC3-202ENST00000340647 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
BRCC3-202ENST00000340647 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
BRCC3-202ENST00000340647 A0A087WWC5 75 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 RAB19A4D1S5 217 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 PSCAO43653 123 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 GZMBP10144 247 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 HAMPP81172 84 aa11.27□□□□□ -0.61
BRCC3-202ENST00000340647 MYCBP2O75592 4640 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 DMBT1Q9UGM3 2413 aaPredicted RBP11.26□□□□□ -0.61
BRCC3-202ENST00000340647 TRBV7-3A0A075B6L6 115 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 RAB5CP51148 216 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 RAB4BP61018 213 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
BRCC3-202ENST00000340647 C1QBP02746 253 aa11.25□□□□□ -0.61
BRCC3-202ENST00000340647 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-202ENST00000340647 IGLV5-52A0A0A0MRZ9 124 aa11.24□□□□□ -0.61
BRCC3-202ENST00000340647 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
BRCC3-202ENST00000340647 SSTP61278 116 aa11.24□□□□□ -0.61
BRCC3-202ENST00000340647 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
BRCC3-202ENST00000340647 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
BRCC3-202ENST00000340647 LECT2O14960 151 aa11.23□□□□□ -0.61
BRCC3-202ENST00000340647 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
BRCC3-202ENST00000340647 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
BRCC3-202ENST00000340647 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
BRCC3-202ENST00000340647 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
BRCC3-202ENST00000340647 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
BRCC3-202ENST00000340647 SMR3BP02814 79 aaPredicted RBP11.22□□□□□ -0.61
BRCC3-202ENST00000340647 SLC51BQ86UW2 128 aa11.22□□□□□ -0.61
BRCC3-202ENST00000340647 C9orf62Q8N4C0 152 aa11.22□□□□□ -0.61
BRCC3-202ENST00000340647 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
BRCC3-202ENST00000340647 TM2D2Q9BX73 214 aa11.22□□□□□ -0.61
BRCC3-202ENST00000340647 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.61
BRCC3-202ENST00000340647 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.61
BRCC3-202ENST00000340647 BCL2P10415 239 aa11.21□□□□□ -0.61
BRCC3-202ENST00000340647 ZNF56Q15929 161 aa11.21□□□□□ -0.61
BRCC3-202ENST00000340647 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
BRCC3-202ENST00000340647 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.61
BRCC3-202ENST00000340647 Q5VSD8 79 aa11.2□□□□□ -0.62
BRCC3-202ENST00000340647 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
BRCC3-202ENST00000340647 ENHOQ6UWT2 76 aa11.2□□□□□ -0.62
BRCC3-202ENST00000340647 TMEM70Q9BUB7 260 aa11.2□□□□□ -0.62
BRCC3-202ENST00000340647 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms