RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 GINS2Q9Y248 185 aa0.8□□□□□ -2.28
SNRPEP3-201ENST00000338402 HIVEP1P15822 2718 aa0.8□□□□□ -2.28
SNRPEP3-201ENST00000338402 MUC12Q9UKN1 5478 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 PREX1Q8TCU6 1659 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 CTTNBP2Q8WZ74 1663 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 J3KT08 172 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 HBDP02042 147 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 GTF2A1P52655 376 aaPredicted RBP0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 CCSMST1Q4G0I0 132 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 CCL19Q99731 98 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 SMIM7Q9BQ49 75 aa0.79□□□□□ -2.28
SNRPEP3-201ENST00000338402 MAP3K4Q9Y6R4 1608 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 ACANP16112 2415 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 IFITM5A6NNB3 132 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 K7EIL1 84 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 GYPBP06028 91 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 CKS2P33552 79 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 SPINT3P49223 89 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 QRFPP83859 136 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 OR8I2Q8N0Y5 310 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 OR8J3Q8NGG0 315 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 CHD7Q9P2D1 2997 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 LAMA1P25391 3075 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 DSPPQ9NZW4 1301 aa0.78□□□□□ -2.28
SNRPEP3-201ENST00000338402 UNC13AQ9UPW8 1703 aa0.78□□□□□ -2.29
SNRPEP3-201ENST00000338402 VIRMAQ69YN4 1812 aaKnown RBP0.78□□□□□ -2.29
SNRPEP3-201ENST00000338402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 A6NN06 94 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 UQCRQO14949 82 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 DPM2O94777 84 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 RPS28P62857 69 aaKnown RBP0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 PSPHP78330 225 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 CSAG1Q6PB30 78 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 Q6ZS92 163 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 TAC4Q86UU9 113 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 ATOH7Q8N100 152 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 C19orf12Q9NSK7 152 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 OVOS2A0A0G2JMS6 1433 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 ZMYM4Q5VZL5 1548 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 LAMA5O15230 3695 aa0.77□□□□□ -2.29
SNRPEP3-201ENST00000338402 DOPEY2Q9Y3R5 2298 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 HELZP42694 1942 aaKnown RBP0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 DIP2AQ14689 1571 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 CEP170BQ9Y4F5 1589 aaPredicted RBP0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 FAT3Q8TDW7 4589 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 MED23Q9ULK4 1368 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 TMEM189A5PLL7 270 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 NBEAP1P0C6P0 100 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 CCL4P13236 92 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 FXYD6P3P58550 94 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 DR1Q01658 176 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
SNRPEP3-201ENST00000338402 AFDNP55196 1824 aaKnown RBP0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 USH2AO75445 5202 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 IGHV1-24A0A0C4DH33 117 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 TMEM30CPA0ZSE6 113 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 TCRAP04437 139 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 SLC25A5P05141 298 aaKnown RBP0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 CAV3P56539 151 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 PCBD1P61457 104 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 XAF1Q6GPH4 301 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 IDO2Q6ZQW0 420 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 OTOSQ8NHW6 89 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 CALML5Q9NZT1 146 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 CACNA1HO95180 2353 aa0.75□□□□□ -2.29
SNRPEP3-201ENST00000338402 MAP1AP78559 2803 aaPredicted RBP0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 EPRSP07814 1512 aaKnown RBP0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 GRIN2AQ12879 1464 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 TRAV36DV7A0A075B6V5 113 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 PNMA8CA0A1B0GUJ8 204 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 PAEPP09466 180 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 HIST1H1BP16401 226 aaKnown RBP0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 ZNF137PP52743 207 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 OR8B8Q15620 311 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 HSD17B12Q53GQ0 312 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 C6orf52Q5T4I8 152 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 SPANXA1Q9NS26 97 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 MRPL36Q9P0J6 103 aaKnown RBP0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 COMMD3Q9UBI1 195 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 LOC285556D6RIA3 1793 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 KIF21AQ7Z4S6 1674 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 CPS1P31327 1500 aa0.74□□□□□ -2.29
SNRPEP3-201ENST00000338402 PTPRQQ9UMZ3 2332 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 DEGS1O15121 323 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 IL7P13232 177 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 KDELR1P24390 212 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 SDC4P31431 198 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 RHOHQ15669 191 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 ASB16-AS1Q495Z4 193 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 C10orf95Q9H7T3 257 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 MRPL35Q9NZE8 188 aaKnown RBP0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 LAMC3Q9Y6N6 1575 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
SNRPEP3-201ENST00000338402 TULP4Q9NRJ4 1543 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms