RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 OXTP01178 125 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 CRIP1P50238 77 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 NPBQ8NG41 125 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
PRKCD-201ENST00000330452 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■■■■□ 21
PRKCD-201ENST00000330452 NDPQ00604 133 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 CRYGDP07320 174 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
PRKCD-201ENST00000330452 PTPN13Q12923 2485 aa13.09□□□□□ -0.31
PRKCD-201ENST00000330452 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
PRKCD-201ENST00000330452 PRORYQ9H606 182 aa13.09□□□□□ -0.31
PRKCD-201ENST00000330452 H3BMM0 161 aa13.08□□□□□ -0.31
PRKCD-201ENST00000330452 PRB1P04280 392 aa13.08□□□□□ -0.31
PRKCD-201ENST00000330452 LYZL1Q6UWQ5 148 aa13.08□□□□□ -0.31
PRKCD-201ENST00000330452 UBE2WQ96B02 151 aa13.08□□□□□ -0.31
PRKCD-201ENST00000330452 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 F8W735 103 aaPredicted RBP13.08□□□□□ -0.32
PRKCD-201ENST00000330452 OVOL1O14753 267 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 CFC1BP0CG36 223 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 CFC1P0CG37 223 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
PRKCD-201ENST00000330452 PLNP26678 52 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 SEC61GP60059 68 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 DTX2Q86UW9 622 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
PRKCD-201ENST00000330452 CRYGAP11844 174 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 EDN2P20800 178 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 IGHV3OR16-8A0A075B7F1 116 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 M0R1W7 72 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 COX7CP15954 63 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 VMO1Q7Z5L0 202 aa13.06□□□□□ -0.32
PRKCD-201ENST00000330452 IGHV3-35A0A0C4DH35 117 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 FAM240AA0A1B0GVK7 77 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 GAS8-AS1O95177 125 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 HLA-DMBP28068 263 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 LINC01620Q4KN68 170 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 IGFL4Q6B9Z1 124 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 C11orf71Q6IPW1 123 aa13.05□□□□□ -0.32
PRKCD-201ENST00000330452 FBN2P35556 2912 aa13.04□□□□□ -0.32
PRKCD-201ENST00000330452 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
PRKCD-201ENST00000330452 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
PRKCD-201ENST00000330452 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
PRKCD-201ENST00000330452 PRO1854Q9UHT4 67 aa13.04□□□□□ -0.32
PRKCD-201ENST00000330452 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
PRKCD-201ENST00000330452 MALP21145 153 aa13.04□□□□□ -0.32
PRKCD-201ENST00000330452 NXT2Q9NPJ8 142 aaKnown RBP13.04□□□□□ -0.32
PRKCD-201ENST00000330452 PRO0628Q9UI54 55 aa13.04□□□□□ -0.32
PRKCD-201ENST00000330452 CYSTM1Q9H1C7 97 aa13.03□□□□□ -0.32
PRKCD-201ENST00000330452 JPT2Q9H910 190 aa13.03□□□□□ -0.32
PRKCD-201ENST00000330452 TLN2Q9Y4G6 2542 aa13.03□□□□□ -0.32
PRKCD-201ENST00000330452 Q8N8P6 123 aa13.02□□□□□ -0.32
PRKCD-201ENST00000330452 ITLN2Q8WWU7 325 aaPredicted RBP13.02□□□□□ -0.32
PRKCD-201ENST00000330452 C2orf48Q96LS8 159 aa13.02□□□□□ -0.32
PRKCD-201ENST00000330452 C1orf43Q9BWL3 253 aa13.02□□□□□ -0.32
PRKCD-201ENST00000330452 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
PRKCD-201ENST00000330452 PDE6HQ13956 83 aa13.02□□□□□ -0.33
PRKCD-201ENST00000330452 TRBV10-2A0A0K0K1G8 114 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 Q8TAT8 98 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 F8VRH5 84 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 SH2D1AO60880 128 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 CTSGP08311 255 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 EGR2P11161 476 aaPredicted RBP13.01□□□□□ -0.33
PRKCD-201ENST00000330452 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
PRKCD-201ENST00000330452 Q8N6K4 173 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
PRKCD-201ENST00000330452 ELANEP08246 267 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 DSCR8Q96T75 97 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 SPANXDQ9BXN6 97 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 ABCA2Q9BZC7 2435 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 SMAD5-AS1Q9Y6J3 95 aa13□□□□□ -0.33
PRKCD-201ENST00000330452 NBPF19A0A087WUL8 3843 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 H7C1H1 209 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 TRACP01848 142 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 ATP5G1P05496 136 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 ATXN8Q156A1 80 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 P0DMU3 169 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 COX6B1P14854 86 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
PRKCD-201ENST00000330452 CUBNO60494 3623 aa12.99□□□□□ -0.33
PRKCD-201ENST00000330452 SLC25A16P16260 332 aa12.98□□□□□ -0.33
PRKCD-201ENST00000330452 ZNF80P51504 273 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms