RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 HIST1H2BBP33778 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BDP58876 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BCP62807 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST2H2BEQ16778 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 DEFB135Q30KP9 77 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 OR10J3Q5JRS4 329 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BHQ93079 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BNQ99877 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BMQ99879 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 U3KQK5 164 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-201ENST00000324444 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
SYNE4-201ENST00000324444 NBEAL2Q6ZNJ1 2754 aa12.98□□□□□ -0.33
SYNE4-201ENST00000324444 ALKBH7Q9BT30 221 aaPredicted RBP12.97□□□□□ -0.33
SYNE4-201ENST00000324444 X6R8D5 127 aa12.97□□□□□ -0.33
SYNE4-201ENST00000324444 SRIP30626 198 aa12.96□□□□□ -0.33
SYNE4-201ENST00000324444 Q0VG73 95 aa12.96□□□□□ -0.33
SYNE4-201ENST00000324444 KIAA1644Q3SXP7 199 aa12.96□□□□□ -0.33
SYNE4-201ENST00000324444 MRPL51Q4U2R6 128 aaKnown RBP12.96□□□□□ -0.33
SYNE4-201ENST00000324444 POM121L12Q8N7R1 296 aa12.96□□□□□ -0.33
SYNE4-201ENST00000324444 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
SYNE4-201ENST00000324444 TRGV1A0A0A0MS02 117 aa12.95□□□□□ -0.34
SYNE4-201ENST00000324444 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
SYNE4-201ENST00000324444 H7C1H1 209 aa12.95□□□□□ -0.34
SYNE4-201ENST00000324444 ZFP2Q6ZN57 461 aa12.95□□□□□ -0.34
SYNE4-201ENST00000324444 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
SYNE4-201ENST00000324444 KMT2CQ8NEZ4 4911 aaKnown RBP12.95□□□□□ -0.34
SYNE4-201ENST00000324444 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 PRM2P04554 102 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 MGPP08493 103 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 D6R8Y8 96 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 RS1O15537 224 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 BAGE3Q86Y29 109 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 SBSPONQ8IVN8 264 aa12.94□□□□□ -0.34
SYNE4-201ENST00000324444 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
SYNE4-201ENST00000324444 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 PLAC8L1A1L4L8 177 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 F5H697 171 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 CRYGDP07320 174 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 NDUFA6P56556 154 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 COA6Q5JTJ3 125 aaKnown RBP12.93□□□□□ -0.34
SYNE4-201ENST00000324444 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
SYNE4-201ENST00000324444 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
SYNE4-201ENST00000324444 ZNF56Q15929 161 aa12.92□□□□□ -0.34
SYNE4-201ENST00000324444 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
SYNE4-201ENST00000324444 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
SYNE4-201ENST00000324444 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
SYNE4-201ENST00000324444 TRGV2A0A075B6R0 118 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 A0A087WWL8 130 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 MAP1LC3AQ9H492 121 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 EDA2RQ9HAV5 297 aa12.91□□□□□ -0.34
SYNE4-201ENST00000324444 IGHV4-28A0A0C4DH34 117 aa12.9□□□□□ -0.34
SYNE4-201ENST00000324444 LINC00315P59091 139 aa12.9□□□□□ -0.34
SYNE4-201ENST00000324444 C20orf78Q9BR46 151 aa12.9□□□□□ -0.34
SYNE4-201ENST00000324444 JPT2Q9H910 190 aa12.9□□□□□ -0.34
SYNE4-201ENST00000324444 EMP1P54849 157 aa12.89□□□□□ -0.35
SYNE4-201ENST00000324444 Q6ZTI0 123 aa12.89□□□□□ -0.35
SYNE4-201ENST00000324444 Q8NAQ8 132 aa12.89□□□□□ -0.35
SYNE4-201ENST00000324444 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 GAGE7O76087 117 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 PRSS3P2Q8NHM4 247 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
SYNE4-201ENST00000324444 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
SYNE4-201ENST00000324444 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
SYNE4-201ENST00000324444 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
SYNE4-201ENST00000324444 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
SYNE4-201ENST00000324444 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
SYNE4-201ENST00000324444 NCR2O95944 276 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 IGHV3-53P01767 116 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 PMCHP20382 165 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 TM2D3Q9BRN9 247 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 C11orf68Q9H3H3 251 aaKnown RBP12.86□□□□□ -0.35
SYNE4-201ENST00000324444 NIT2Q9NQR4 276 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 MUC4Q99102 2169 aa12.86□□□□□ -0.35
SYNE4-201ENST00000324444 TRBV6-5A0A0K0K1A5 114 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 K7EMI3 77 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 NPYP01303 97 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 LINC00614P0C842 121 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 HOXA5P20719 270 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 S100A2P29034 98 aa12.85□□□□□ -0.35
SYNE4-201ENST00000324444 SNRPEP62304 92 aaKnown RBP12.85□□□□□ -0.35
SYNE4-201ENST00000324444 RPL32P62910 135 aaKnown RBP12.85□□□□□ -0.35
SYNE4-201ENST00000324444 FAM222AQ5U5X8 452 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms