RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TRAV8-1A0A0A6YYK1 113 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 PRAC2D3DTV9 90 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 TSPAN13O95857 204 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.88
DDX39A-202ENST00000324340 HBDP02042 147 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 PHLDA1Q8WV24 401 aaPredicted RBP9.52□□□□□ -0.88
DDX39A-202ENST00000324340 TMEM158Q8WZ71 300 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.88
DDX39A-202ENST00000324340 PSG8Q9UQ74 426 aa9.52□□□□□ -0.88
DDX39A-202ENST00000324340 LINC01546A6NGU7 62 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 IGLV1-51P01701 117 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
DDX39A-202ENST00000324340 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 SGK494Q96LW2 274 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 CYSLTR1Q9Y271 337 aa9.51□□□□□ -0.89
DDX39A-202ENST00000324340 PRNTQ86SH4 94 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 ZNF256Q9Y2P7 627 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-202ENST00000324340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-202ENST00000324340 PRB4P10163 310 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-202ENST00000324340 EVI2AP22794 236 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 CRYBA4P53673 196 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 SHISA2Q6UWI4 295 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 IFI27L1Q96BM0 104 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 AGPAT4-IT1Q9H0P7 198 aa9.5□□□□□ -0.89
DDX39A-202ENST00000324340 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
DDX39A-202ENST00000324340 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 INSL3P51460 131 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 C3orf56Q8N813 242 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 OR8A1Q8NGG7 326 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 PRR25Q96S07 402 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 DNHD1Q96M86 4753 aa9.49□□□□□ -0.89
DDX39A-202ENST00000324340 A0A096LNJ9 63 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 NCR2O95944 276 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 ZNF138P52744 262 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 ERCC8Q13216 396 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 CEND1Q8N111 149 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 Q8TAT8 98 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
DDX39A-202ENST00000324340 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 IGLL5B9A064 214 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 F6UB75 175 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 RAB37Q96AX2 223 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
DDX39A-202ENST00000324340 A0A0J9YX75 114 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 H3BMG7 143 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 ATP5LO75964 103 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 DEFB1P60022 68 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 CACNG7P62955 275 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 LINC00322Q6ZN03 302 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-202ENST00000324340 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 C8orf49Q96NF6 230 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 FAM110AQ9BQ89 295 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.9
DDX39A-202ENST00000324340 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
DDX39A-202ENST00000324340 WIPF1O43516 503 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 SNAI2O43623 268 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 GCSHP23434 173 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-202ENST00000324340 TCTAP57738 103 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 DEFB131AP59861 70 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 LYRM7Q5U5X0 104 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 FAM104BQ5XKR9 115 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 ODF3Q96PU9 254 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 ASCL2Q99929 193 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
DDX39A-202ENST00000324340 A8MTW9 85 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 H0Y8G0 127 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 DUSP14O95147 198 aaKnown RBP9.44□□□□□ -0.9
DDX39A-202ENST00000324340 CRIP1P50238 77 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 FXYD2P54710 66 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 ERG28Q9UKR5 140 aa9.44□□□□□ -0.9
DDX39A-202ENST00000324340 IFI27P40305 119 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-202ENST00000324340 WFDC2Q14508 124 aa9.43□□□□□ -0.9
DDX39A-202ENST00000324340 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
DDX39A-202ENST00000324340 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
DDX39A-202ENST00000324340 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
DDX39A-202ENST00000324340 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
DDX39A-202ENST00000324340 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
DDX39A-202ENST00000324340 NMUP48645 174 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms