RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 GDF5OSQ5U4N7 250 aa8.33□□□□□ -1.08
SNRNP200-201ENST00000323853 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
SNRNP200-201ENST00000323853 DAND5Q8N907 189 aa8.33□□□□□ -1.08
SNRNP200-201ENST00000323853 PIFOQ8TCI5 191 aa8.33□□□□□ -1.08
SNRNP200-201ENST00000323853 NCR3O14931 201 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 A0A0B4J2C4 111 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 A0A0J9YX75 114 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 C1orf43Q9BWL3 253 aa8.32□□□□□ -1.08
SNRNP200-201ENST00000323853 RS1O15537 224 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 PTPRZ1P23471 2315 aaPredicted RBP8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 NFE4Q86UQ8 179 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 CRYGBP07316 175 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 LOXL1Q08397 574 aaPredicted RBP8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 PROP1O75360 226 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 Q9HAA7 133 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 TNRC6AQ8NDV7 1962 aaKnown RBP8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 MYO7BQ6PIF6 2116 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 MYCNOSP40205 109 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 HIST2H2BCQ6DN03 193 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 hADV29S1A0JD25 119 aa8.31□□□□□ -1.08
SNRNP200-201ENST00000323853 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 MRAPQ8TCY5 172 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 LGALS9O00182 355 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 WFDC2Q14508 124 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 H3BQ85 93 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 UBE2BP63146 152 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
SNRNP200-201ENST00000323853 FOXI1Q12951 378 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 C20orf203Q8NBC4 194 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
SNRNP200-201ENST00000323853 RNASE8Q8TDE3 154 aaKnown RBP8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 ETDCA0A1B0GVM5 59 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 G3V4G9 280 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 LINC01548A6NM66 108 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 PI4KAP42356 2102 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 TNRC6BQ9UPQ9 1833 aaKnown RBP8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 TNFRSF13BO14836 293 aaPredicted RBP8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 SS18L2Q9UHA2 77 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
SNRNP200-201ENST00000323853 FSTL3O95633 263 aa8.27□□□□□ -1.08
SNRNP200-201ENST00000323853 CXCL5P42830 114 aa8.27□□□□□ -1.08
SNRNP200-201ENST00000323853 LY6LH3BQJ8 138 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 TMEM61Q8N0U2 210 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 ESM1Q9NQ30 184 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 TIRAPP58753 221 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 NDUFA11Q86Y39 141 aa8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 CITED2Q99967 270 aaPredicted RBP8.27□□□□□ -1.09
SNRNP200-201ENST00000323853 LMO4P61968 165 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 PRORYQ9H606 182 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 TRIOBPQ9H2D6 2365 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 F8W735 103 aaPredicted RBP8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 NDUFA1O15239 70 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 AHCTF1Q8WYP5 2266 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 DNAJC13O75165 2243 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 DNAJC9-AS1A6NH13 148 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 Q6ZUT4 128 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 MBD6Q96DN6 1003 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 MIAQ16674 131 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 EML6Q6ZMW3 1958 aa8.26□□□□□ -1.09
SNRNP200-201ENST00000323853 ESPL1Q14674 2120 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 CITED1Q99966 193 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 U3KQK5 164 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 IGF1P05019 195 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 B5MCH6 92 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 NEXN-AS1Q8NBZ9 246 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 C19orf84I3L1E1 186 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 SMAD5-AS1Q9Y6J3 95 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 CACNA1DQ01668 2161 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 P0DMU3 169 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
SNRNP200-201ENST00000323853 CCL18P55774 89 aa8.24□□□□□ -1.09
SNRNP200-201ENST00000323853 NDUFS5O43920 106 aa8.24□□□□□ -1.09
SNRNP200-201ENST00000323853 Q6YL49 198 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms